Os12g0177900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldehyde dehydrogenase domain containing protein.
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Os12g0177900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldehyde dehydrogenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280.94 | 0.788 | 5.91 | 1.04 | 1.51 | -2.22 | 2.59 | 0.308 | -0.332 | 7.65 | 22.13 | 1432 | -- | -- |
| 281.17 | 0.781 | 5.92 | 0.962 | 1.49 | -2.24 | 2.56 | -- | -0.341 | 7.68 | 22.1 | 1445 | -- | -- |
| 299.68 | 0.806 | 5.91 | 1.11 | 1.5 | -2.21 | -- | 0.311 | -0.338 | 7.83 | 22.1 | 1459 | -- | -- |
| 299.92 | 0.807 | 5.92 | 0.999 | 1.5 | -2.21 | -- | -- | -0.359 | 7.84 | 22.2 | 1459 | -- | -- |
| 370.28 | 0.896 | 5.98 | 0.851 | -- | -2.3 | -- | -0.493 | -0.366 | -- | 22.1 | 738 | -- | -- |
| 460.25 | 1.01 | 6.08 | 0.133 | 1.49 | -- | 2.44 | -- | -1.09 | 7.86 | -- | -- | -- | -- |
| 477.29 | 1.02 | 6.09 | 0.201 | 1.48 | -- | -- | -- | -1.09 | 8.06 | -- | -- | -- | -- |
| 370.68 | 0.897 | 5.96 | 0.955 | -- | -2.23 | -- | -- | -0.338 | -- | 22.13 | 760 | -- | -- |
| 320.97 | 0.834 | 5.96 | -- | 1.4 | -1.87 | -- | -- | -0.537 | 7.37 | 22.4 | 1122 | -- | -- |
| 597.51 | 1.14 | 6.12 | 0.214 | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
| 478.35 | 1.02 | 6.09 | -- | 1.48 | -- | -- | -- | -1.11 | 8.05 | -- | -- | -- | -- |
| 392.85 | 0.923 | 5.99 | -- | -- | -2.03 | -- | -- | -0.487 | -- | 22.26 | 758 | -- | -- |
| 598.72 | 1.14 | 6.13 | -- | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 287.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 3 | 287.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 42 | 290.01 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 65 | 290.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 86 | 291.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 106 | 292.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 126 | 292.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 144 | 293.17 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 148 | 293.23 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 185 | 294.00 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 187 | 294.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 257 | 294.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 268 | 295.05 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 279 | 295.16 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 296 | 295.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 485 | 297.31 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 780 | 301.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 845 | 302.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |