Os12g0156500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os12g0156500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.5 | 0.614 | 3.07 | 0.835 | 0.076 | -1.54 | 0.28 | -3.06 | 0.0945 | 11.3 | 19.85 | 5680 | -- | -- |
| 180.31 | 0.625 | 2.93 | 1.1 | 0.0579 | -0.787 | 0.193 | -- | 0.239 | 12.5 | 21.59 | 3572 | -- | -- |
| 170.76 | 0.609 | 3.07 | 0.847 | 0.0833 | -1.54 | -- | -3.06 | 0.0962 | 13.1 | 19.82 | 5679 | -- | -- |
| 179.87 | 0.625 | 2.93 | 1.02 | 0.0772 | -0.691 | -- | -- | 0.201 | 13.1 | 22.04 | 3938 | -- | -- |
| 171.19 | 0.609 | 3.07 | 0.845 | -- | -1.55 | -- | -3.08 | 0.0968 | -- | 19.81 | 5676 | -- | -- |
| 193.68 | 0.652 | 2.99 | 0.626 | 0.106 | -- | 0.298 | -- | -0.0628 | 12.1 | -- | -- | -- | -- |
| 193.98 | 0.652 | 2.99 | 0.639 | 0.113 | -- | -- | -- | -0.0605 | 13.5 | -- | -- | -- | -- |
| 180.14 | 0.625 | 2.94 | 1.02 | -- | -0.697 | -- | -- | 0.199 | -- | 22.06 | 3905 | -- | -- |
| 198.46 | 0.656 | 2.97 | -- | 0.105 | -0.342 | -- | -- | -0.0195 | 13.7 | 23.6 | 2090 | -- | -- |
| 194.76 | 0.652 | 3 | 0.634 | -- | -- | -- | -- | -0.0629 | -- | -- | -- | -- | -- |
| 204.74 | 0.669 | 3.01 | -- | 0.102 | -- | -- | -- | -0.132 | 13.3 | -- | -- | -- | -- |
| 198.42 | 0.656 | 2.98 | -- | -- | -0.384 | -- | -- | 0.00829 | -- | 23.8 | 2141 | -- | -- |
| 205.37 | 0.669 | 3.01 | -- | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.00 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 2 | 163.38 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 5 | 164.22 | wind | 5 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 19 | 166.17 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 22 | 166.43 | wind | 5 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 24 | 166.51 | wind | 5 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 46 | 168.79 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 51 | 169.02 | wind | 3 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 60 | 169.81 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 78 | 170.39 | wind | 5 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 82 | 170.67 | wind | 5 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 91 | 170.90 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 93 | 170.92 | wind | 5 | 4320 | > th | dose independent | rect. | 19 | 15 |
| 105 | 171.13 | humidity | 80 | 720 | < th | dose independent | rect. | 24 | 1 |
| 108 | 171.13 | humidity | 80 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 116 | 171.21 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 119 | 171.23 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 140 | 171.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 16 |
| 145 | 171.39 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 166 | 171.56 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 11 |
| 172 | 171.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 174 | 171.61 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 201 | 171.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 213 | 171.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 216 | 171.81 | wind | 5 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 257 | 171.98 | wind | 5 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 258 | 171.99 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 288 | 172.10 | wind | 5 | 4320 | < th | dose independent | sin | 10 | NA |
| 364 | 172.45 | humidity | 80 | 10 | < th | dose dependent | rect. | 22 | 2 |
| 367 | 172.47 | humidity | 80 | 10 | < th | dose independent | rect. | 22 | 2 |
| 375 | 172.49 | wind | 5 | 4320 | > th | dose independent | sin | 10 | NA |
| 391 | 172.60 | humidity | 80 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 412 | 172.69 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 4 |
| 419 | 172.70 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 430 | 172.73 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 13 |
| 437 | 172.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 21 |
| 440 | 172.76 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 2 |
| 449 | 172.76 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 536 | 173.02 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 545 | 173.03 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 566 | 173.08 | wind | 5 | 1440 | > th | dose dependent | rect. | 22 | 11 |
| 594 | 173.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 601 | 173.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 20 |
| 607 | 173.18 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 21 |
| 659 | 173.31 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 695 | 173.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 744 | 173.51 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 756 | 173.53 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 878 | 173.89 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 23 |
| 895 | 173.97 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 910 | 174.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 924 | 174.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 930 | 174.07 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 964 | 174.21 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 4 |
| 987 | 174.27 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 8 |