Os12g0156000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os12g0156000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.68 | 0.406 | 10.5 | 0.574 | 0.122 | 0.794 | 0.391 | -0.713 | -0.0266 | 10.3 | 19.3 | 698 | -- | -- |
| 74.94 | 0.403 | 10.5 | 0.552 | 0.111 | 1.04 | 0.336 | -- | -0.0295 | 9.92 | 19.23 | 707 | -- | -- |
| 75.2 | 0.404 | 10.5 | 0.578 | 0.127 | 0.85 | -- | -0.462 | -0.025 | 11.2 | 19.24 | 658 | -- | -- |
| 75.29 | 0.404 | 10.5 | 0.56 | 0.116 | 1.01 | -- | -- | -0.0332 | 11.1 | 19.22 | 656 | -- | -- |
| 76.02 | 0.406 | 10.5 | 0.641 | -- | 0.739 | -- | -0.246 | 0.0455 | -- | 23.33 | 783 | -- | -- |
| 81.7 | 0.424 | 10.5 | 0.375 | 0.173 | -- | 0.201 | -- | -0.0992 | 10.9 | -- | -- | -- | -- |
| 81.86 | 0.424 | 10.5 | 0.384 | 0.172 | -- | -- | -- | -0.0982 | 11.2 | -- | -- | -- | -- |
| 75.97 | 0.406 | 10.5 | 0.566 | -- | 0.697 | -- | -- | 0.00964 | -- | 47.62 | 828 | -- | -- |
| 82.11 | 0.422 | 10.5 | -- | 0.144 | 0.846 | -- | -- | -0.119 | 10.8 | 17.47 | 564 | -- | -- |
| 83.71 | 0.428 | 10.5 | 0.38 | -- | -- | -- | -- | -0.0997 | -- | -- | -- | -- | -- |
| 85.75 | 0.433 | 10.5 | -- | 0.169 | -- | -- | -- | -0.141 | 11 | -- | -- | -- | -- |
| 83.31 | 0.425 | 10.5 | -- | -- | 0.859 | -- | -- | -0.118 | -- | 17.9 | 608 | -- | -- |
| 87.52 | 0.437 | 10.5 | -- | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 11 | 71.38 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 21 | 71.81 | temperature | 15.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 24 | 71.94 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 36 | 72.28 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 9 |
| 42 | 72.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 45 | 72.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 48 | 72.55 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 51 | 72.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 52 | 72.60 | wind | 3.0 | 30 | > th | dose independent | rect. | 9 | 3 |
| 57 | 72.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 69 | 72.78 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 79 | 72.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 88 | 72.98 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 23 |
| 90 | 72.99 | wind | 1.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 91 | 73.00 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 8 |
| 99 | 73.07 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 122 | 73.19 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 128 | 73.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 130 | 73.22 | wind | 3.0 | 10 | > th | dose independent | rect. | 3 | 9 |
| 146 | 73.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 149 | 73.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 159 | 73.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 161 | 73.35 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 165 | 73.37 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 8 | 4 |
| 169 | 73.39 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 23 |
| 171 | 73.39 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 174 | 73.41 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 23 |
| 178 | 73.43 | humidity | 50.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 182 | 73.45 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 185 | 73.46 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 188 | 73.47 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 192 | 73.47 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 193 | 73.47 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 202 | 73.49 | wind | 1.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 203 | 73.49 | wind | 1.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 211 | 73.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 213 | 73.54 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 214 | 73.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 218 | 73.55 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 23 |
| 219 | 73.56 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 225 | 73.58 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 227 | 73.58 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 228 | 73.58 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 229 | 73.58 | radiation | 1.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 230 | 73.58 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 1 |
| 234 | 73.58 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 236 | 73.59 | radiation | 1.0 | 90 | < th | dose independent | sin | 14 | NA |
| 249 | 73.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 266 | 73.67 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 268 | 73.67 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 274 | 73.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 279 | 73.70 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 281 | 73.71 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 282 | 73.71 | temperature | 10.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 286 | 73.72 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 2 | 3 |
| 300 | 73.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 306 | 73.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 17 |
| 308 | 73.76 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 311 | 73.77 | radiation | 1.0 | 90 | > th | dose independent | sin | 14 | NA |
| 321 | 73.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 326 | 73.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 8 |
| 354 | 73.83 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 358 | 73.83 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 370 | 73.85 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 373 | 73.85 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 376 | 73.85 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 388 | 73.87 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 400 | 73.89 | radiation | 10.0 | 90 | < th | dose dependent | sin | 14 | NA |
| 406 | 73.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 22 |
| 428 | 73.92 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 441 | 73.94 | radiation | 30.0 | 10 | > th | dose independent | rect. | 9 | 3 |
| 442 | 73.94 | temperature | 30.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 471 | 73.98 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 472 | 73.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 14 |
| 474 | 73.98 | radiation | 1.0 | 90 | > th | dose independent | rect. | 12 | 20 |
| 482 | 73.99 | radiation | 40.0 | 30 | < th | dose independent | rect. | 1 | 10 |
| 483 | 73.99 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 484 | 73.99 | temperature | 30.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 485 | 73.99 | wind | 1.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 488 | 73.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 490 | 74.00 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 2 |
| 492 | 74.00 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 493 | 74.00 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 496 | 74.00 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 518 | 74.02 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 532 | 74.04 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 548 | 74.05 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 17 | 13 |
| 553 | 74.06 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 564 | 74.07 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 16 |
| 570 | 74.07 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 576 | 74.08 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 17 | 11 |
| 590 | 74.10 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 605 | 74.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 615 | 74.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 622 | 74.12 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 2 |
| 652 | 74.15 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 697 | 74.18 | humidity | 50.0 | 90 | > th | dose dependent | sin | 15 | NA |
| 758 | 74.21 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 830 | 74.25 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 851 | 74.27 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 852 | 74.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 864 | 74.27 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 868 | 74.28 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 881 | 74.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 891 | 74.29 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 913 | 74.31 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 924 | 74.32 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 933 | 74.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 934 | 74.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 22 |
| 946 | 74.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 969 | 74.36 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 980 | 74.37 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 2 |