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Os12g0151500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Alpha-2,8-sialyltransferase 8B (EC 2.4.99.-) (ST8Sia II) (Sialyltransferase X) (STX).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0257) R2 : 0.812
β1 : -0.735 (0.0942) R2dD : 0.0262 R2D : 0.0227
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.46 (0.0812) R2dE : 0.752 R2E : 0.764
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.41 (0.0549) R2dN8 : 0.0309 R2N8 : 0.0206
σ : 0.481
deviance : 106.52
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 0.35
memory length : 720
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
104.57 0.48 11.8 -0.818 0.0827 -3.4 -1.57 -1.59 -0.442 4.32 0.3568 725 -- --
105.38 0.478 11.8 -0.758 0.0971 -3.38 -0.613 -- -0.441 3.51 0.3055 727 -- --
106.29 0.48 11.8 -0.746 0.22 -3.23 -- 0.164 -0.418 5.16 0.3095 725 -- --
106.32 0.48 11.8 -0.755 0.24 -3.21 -- -- -0.427 4.96 0.3 727 -- --
106.49 0.481 11.8 -0.74 -- -3.46 -- 0.0898 -0.406 -- 0.3563 720 -- --
126.36 0.527 11.8 -1.03 2.79 -- 0.106 -- -0.553 5.68 -- -- -- --
126.39 0.526 11.8 -1.03 2.79 -- -- -- -0.553 5.67 -- -- -- --
106.52 0.481 11.8 -0.735 -- -3.46 -- -- -0.41 -- 0.35 720 -- --
120.74 0.512 11.8 -- 0.0183 -3.47 -- -- -0.364 4.07 0.24 731 -- --
531.61 1.08 11.8 -0.944 -- -- -- -- -0.486 -- -- -- -- --
154.51 0.581 11.8 -- 2.78 -- -- -- -0.438 5.69 -- -- -- --
120.53 0.511 11.8 -- -- -3.53 -- -- -0.343 -- 0.24 727 -- --
555.12 1.1 11.8 -- -- -- -- -- -0.382 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 94.98 radiation 1.0 270 < th dose dependent sin 22 NA
2 95.76 radiation 1.0 270 < th dose dependent rect. 14 7
3 95.93 radiation 1.0 270 > th dose independent sin 22 NA
5 95.99 radiation 1.0 270 < th dose dependent rect. 6 15
9 96.42 radiation 1.0 270 < th dose dependent rect. 9 12
11 96.53 radiation 1.0 270 < th dose independent sin 22 NA
23 97.80 radiation 1.0 270 < th dose independent rect. 14 7
24 97.86 radiation 1.0 270 < th dose independent rect. 6 15
30 98.31 radiation 1.0 270 < th dose independent rect. 9 12
33 98.44 radiation 1.0 270 < th dose independent rect. 5 17
60 99.52 radiation 1.0 90 < th dose dependent sin 18 NA
76 100.27 radiation 1.0 270 < th dose dependent rect. 3 20
78 100.33 temperature 20.0 90 > th dose dependent rect. 13 15
86 100.71 temperature 30.0 90 < th dose dependent rect. 17 6
88 100.78 temperature 25.0 270 < th dose independent rect. 15 7
107 101.37 precipitation 0.1 270 < th dose independent rect. 13 14
108 101.37 precipitation 0.1 270 < th dose dependent rect. 13 14
126 101.95 temperature 10.0 90 > th dose dependent rect. 13 15
143 102.12 radiation 1.0 90 < th dose independent sin 18 NA
145 102.14 wind 1.0 43200 < th dose independent rect. 23 3
147 102.15 radiation 1.0 90 > th dose independent sin 18 NA
154 102.32 humidity 50.0 270 > th dose independent rect. 3 10
157 102.38 radiation 1.0 270 > th dose independent rect. 9 9
162 102.42 wind 7.0 14400 > th dose dependent rect. 2 12
163 102.43 radiation 1.0 270 > th dose independent rect. 9 21
164 102.43 wind 7.0 14400 > th dose dependent rect. 23 15
170 102.48 radiation 1.0 720 < th dose dependent sin 14 NA
183 102.66 atmosphere 1000.0 10 > th dose independent rect. 24 19
193 102.78 wind 9.0 14400 > th dose independent rect. 18 20
197 102.81 wind 1.0 43200 < th dose dependent rect. 24 1
198 102.81 radiation 1.0 720 < th dose dependent rect. 16 13
200 102.83 wind 9.0 14400 < th dose independent rect. 22 16
206 102.95 wind 9.0 14400 > th dose independent sin 7 NA
212 102.98 wind 9.0 14400 > th dose dependent rect. 18 21
234 103.16 wind 1.0 43200 < th dose dependent rect. 23 3
236 103.16 temperature 20.0 270 > th dose dependent rect. 11 16
240 103.20 radiation 1.0 720 < th dose dependent rect. 15 16
242 103.24 wind 9.0 14400 < th dose independent sin 7 NA
252 103.35 temperature 10.0 30 > th dose dependent rect. 24 19
260 103.44 wind 9.0 10 < th dose independent rect. 24 19
264 103.49 atmosphere 1005.0 43200 < th dose independent rect. 22 1
265 103.49 wind 1.0 43200 < th dose independent rect. 21 5
267 103.50 wind 7.0 14400 > th dose dependent sin 5 NA
270 103.54 wind 1.0 43200 > th dose independent rect. 23 3
273 103.56 atmosphere 1005.0 43200 < th dose independent rect. 10 2
276 103.59 temperature 30.0 10 < th dose dependent rect. 17 7
288 103.64 wind 9.0 14400 > th dose independent rect. 22 16
291 103.65 wind 7.0 14400 > th dose dependent rect. 9 5
294 103.66 wind 1.0 43200 < th dose dependent rect. 21 5
303 103.74 wind 1.0 43200 < th dose dependent rect. 13 13
316 103.88 temperature 25.0 90 > th dose independent rect. 13 14
318 103.89 wind 9.0 14400 < th dose independent rect. 18 20
341 103.96 atmosphere 995.0 270 > th dose independent rect. 22 19
348 104.00 atmosphere 1005.0 43200 > th dose independent rect. 10 1
349 104.01 wind 1.0 43200 < th dose independent rect. 24 1
351 104.01 wind 9.0 14400 > th dose dependent sin 7 NA
371 104.11 temperature 25.0 270 > th dose independent rect. 11 14
377 104.13 radiation 1.0 720 < th dose dependent rect. 6 23
381 104.17 wind 7.0 14400 > th dose independent rect. 10 2
399 104.24 wind 9.0 10 < th dose independent rect. 19 5
401 104.26 temperature 10.0 10 > th dose independent rect. 19 5
402 104.26 temperature 30.0 10 < th dose independent rect. 19 5
403 104.26 humidity 50.0 10 > th dose independent rect. 19 5
405 104.26 atmosphere 995.0 10 > th dose independent rect. 19 5
406 104.26 radiation 1.0 10 < th dose independent rect. 19 5
411 104.26 temperature 10.0 10 > th dose independent rect. 24 19
412 104.26 radiation 1.0 10 < th dose dependent rect. 19 5
420 104.30 temperature 10.0 270 > th dose independent rect. 3 10
421 104.30 atmosphere 995.0 270 > th dose independent rect. 3 10
422 104.30 atmosphere 1015.0 270 < th dose independent rect. 3 10
423 104.30 temperature 10.0 270 > th dose independent rect. 13 14
425 104.32 temperature 30.0 270 < th dose dependent rect. 19 1
426 104.33 atmosphere 1015.0 10 < th dose independent rect. 24 19
430 104.35 precipitation 0.1 270 < th dose independent rect. 22 19
431 104.35 precipitation 0.1 10 < th dose independent rect. 24 19
432 104.35 precipitation 0.1 270 < th dose dependent rect. 22 19
433 104.35 precipitation 0.1 10 < th dose dependent rect. 24 19
447 104.39 humidity 60.0 30 > th dose independent rect. 19 18
467 104.46 temperature 20.0 30 > th dose dependent sin 16 NA
468 104.47 wind 1.0 43200 > th dose independent rect. 24 1
470 104.48 wind 7.0 14400 < th dose independent rect. 10 2
483 104.53 precipitation 0.1 270 < th dose independent rect. 20 23
485 104.53 precipitation 0.1 270 < th dose dependent rect. 20 23
487 104.54 wind 1.0 43200 < th dose dependent rect. 8 18
489 104.57 atmosphere 995.0 270 > th dose independent rect. 13 14
500 104.63 radiation 20.0 14400 < th dose independent rect. 1 5
504 104.65 humidity 50.0 270 > th dose independent rect. 17 5
512 104.69 precipitation 0.1 10 < th dose independent rect. 19 5
514 104.69 precipitation 0.1 10 < th dose dependent rect. 19 5
519 104.72 wind 9.0 270 < th dose independent rect. 13 14
525 104.75 wind 9.0 14400 > th dose independent rect. 22 14
591 104.88 wind 9.0 14400 < th dose independent rect. 2 12
595 104.91 wind 9.0 270 < th dose independent rect. 22 19
599 104.93 temperature 10.0 270 > th dose independent rect. 17 5
600 104.93 radiation 20.0 270 < th dose independent rect. 17 5
603 104.93 radiation 1.0 720 < th dose independent rect. 15 15
604 104.93 temperature 10.0 270 > th dose independent rect. 22 19
606 104.94 wind 9.0 270 < th dose independent rect. 3 10
614 104.96 precipitation 0.1 270 < th dose independent rect. 3 10
617 104.96 precipitation 0.1 270 < th dose dependent rect. 3 10
636 105.00 radiation 1.0 720 > th dose independent sin 14 NA
640 105.01 wind 7.0 14400 > th dose independent rect. 5 9
642 105.01 atmosphere 995.0 270 > th dose independent rect. 23 17
652 105.04 wind 9.0 270 < th dose independent rect. 17 5
676 105.12 humidity 50.0 270 > th dose dependent rect. 16 6
696 105.19 humidity 80.0 43200 > th dose independent rect. 19 4
708 105.23 temperature 25.0 10 < th dose independent rect. 17 7
724 105.31 radiation 1.0 720 < th dose independent sin 14 NA
728 105.32 wind 7.0 14400 < th dose independent rect. 5 9
734 105.33 humidity 80.0 43200 < th dose independent rect. 19 4
748 105.36 humidity 80.0 43200 > th dose independent rect. 20 2
780 105.45 radiation 1.0 720 > th dose independent rect. 13 17
781 105.45 radiation 1.0 720 < th dose dependent no NA NA
797 105.50 wind 3.0 43200 < th dose dependent rect. 9 3
832 105.60 humidity 60.0 43200 > th dose independent rect. 24 13
837 105.62 humidity 50.0 10 > th dose dependent rect. 17 7
850 105.66 precipitation 0.1 270 < th dose independent rect. 23 17
853 105.66 precipitation 0.1 270 < th dose dependent rect. 23 17
874 105.71 wind 1.0 10 > th dose independent rect. 19 5
880 105.72 humidity 50.0 270 > th dose dependent rect. 17 18
883 105.73 humidity 50.0 10 > th dose dependent rect. 19 5
891 105.75 atmosphere 1015.0 10 < th dose independent rect. 19 5
897 105.77 wind 9.0 270 < th dose independent rect. 23 17
910 105.82 atmosphere 1015.0 270 < th dose independent rect. 22 19
929 105.87 humidity 80.0 43200 < th dose independent rect. 20 2
937 105.90 humidity 60.0 43200 > th dose independent sin 7 NA
939 105.90 radiation 1.0 720 < th dose dependent rect. 21 23
946 105.93 radiation 1.0 720 > th dose independent rect. 15 15
955 105.96 temperature 10.0 270 > th dose independent rect. 16 7
956 105.96 radiation 40.0 270 < th dose independent rect. 16 7
958 105.96 temperature 10.0 270 > th dose independent rect. 23 17
979 106.01 temperature 25.0 720 > th dose dependent rect. 15 19
980 106.02 wind 9.0 270 < th dose independent rect. 16 7
986 106.04 atmosphere 995.0 270 > th dose independent rect. 17 5