Os12g0149900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os12g0149900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.23 | 0.454 | 12 | 1.7 | 2.06 | -1.25 | -0.763 | -3.81 | 0.603 | 7.25 | 1.26 | 12840 | -- | -- |
| 102.75 | 0.472 | 12.1 | 1.3 | 2.13 | -0.476 | -0.906 | -- | 0.555 | 7.15 | 6.346 | 15402 | -- | -- |
| 93.4 | 0.45 | 12.1 | 1.67 | 2.2 | -1.27 | -- | -3.91 | 0.588 | 7.27 | 1.462 | 12612 | -- | -- |
| 103.94 | 0.475 | 12.1 | 1.26 | 2.16 | -0.66 | -- | -- | 0.457 | 7.1 | 6.256 | 15358 | -- | -- |
| 294.57 | 0.804 | 12.2 | 1.15 | -- | -0.528 | -- | 0.833 | 0.607 | -- | 0.04719 | 46136 | -- | -- |
| 112.53 | 0.497 | 12.1 | 1.18 | 2.02 | -- | -0.885 | -- | 0.612 | 7.09 | -- | -- | -- | -- |
| 114.57 | 0.501 | 12.1 | 1.16 | 2.02 | -- | -- | -- | 0.613 | 7.06 | -- | -- | -- | -- |
| 299 | 0.809 | 12.2 | 1.17 | -- | -0.523 | -- | -- | 0.617 | -- | 0.04719 | 46136 | -- | -- |
| 95.56 | 0.455 | 12.2 | -- | 2.02 | -1.17 | -- | -- | 0.101 | 7.11 | 1.331 | 47520 | -- | -- |
| 328.92 | 0.847 | 12.2 | 1.2 | -- | -- | -- | -- | 0.65 | -- | -- | -- | -- | -- |
| 150.34 | 0.574 | 12.2 | -- | 2.03 | -- | -- | -- | 0.483 | 7.02 | -- | -- | -- | -- |
| 310.02 | 0.82 | 12.3 | -- | -- | -1.19 | -- | -- | 0.126 | -- | 1.292 | 47520 | -- | -- |
| 367.19 | 0.894 | 12.2 | -- | -- | -- | -- | -- | 0.516 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 2 | 89.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 3 | 89.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 4 | 89.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 89.93 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 6 | 90.00 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 7 | 90.01 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 11 | 90.32 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 13 | 90.40 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 17 | 90.43 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 23 | 90.49 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 26 | 90.54 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 29 | 90.55 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 31 | 90.56 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 32 | 90.56 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 37 | 90.59 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 49 | 90.70 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 52 | 90.72 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 68 | 90.91 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 69 | 90.92 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 74 | 90.94 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 108 | 91.12 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 122 | 91.16 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 125 | 91.17 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 126 | 91.17 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 128 | 91.18 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 4 | NA |
| 136 | 91.18 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 141 | 91.21 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 145 | 91.24 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 148 | 91.24 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 167 | 91.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 185 | 91.33 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 186 | 91.34 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 201 | 91.39 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 213 | 91.44 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 250 | 91.52 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 271 | 91.54 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 287 | 91.56 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 312 | 91.62 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 313 | 91.62 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 350 | 91.67 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 363 | 91.68 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 376 | 91.70 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 450 | 91.75 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 508 | 91.78 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 515 | 91.79 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 517 | 91.80 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 533 | 91.81 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 566 | 91.84 | temperature | 20.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 595 | 91.85 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 604 | 91.86 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 615 | 91.87 | temperature | 20.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 631 | 91.87 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 632 | 91.87 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 658 | 91.88 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 781 | 91.94 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 799 | 91.95 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 21 |
| 806 | 91.95 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 4 |
| 942 | 92.01 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 956 | 92.02 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 974 | 92.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |