BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0149900 Os12g0149900|AK072203
(477 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52870.1 | chr3:19593365-19595686 REVERSE LENGTH=457 518 e-147
AT3G13600.1 | chr3:4445102-4447383 FORWARD LENGTH=606 442 e-124
AT3G58480.1 | chr3:21629341-21631853 FORWARD LENGTH=576 390 e-109
AT2G26190.1 | chr2:11147901-11150082 REVERSE LENGTH=533 355 4e-98
AT5G57010.1 | chr5:23068207-23070203 FORWARD LENGTH=496 332 4e-91
AT4G33050.2 | chr4:15944604-15946736 REVERSE LENGTH=527 329 2e-90
>AT3G52870.1 | chr3:19593365-19595686 REVERSE LENGTH=457
Length = 456
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/418 (61%), Positives = 321/418 (76%), Gaps = 19/418 (4%)
Query: 39 TKLQKVYRSYRTRRKLADSAVVVEELWWQALDFARLSHSTVSFFDDPKPETVASRWNRVS 98
K+QKVYRSYRTRR+LADS VV EELWWQA+D+ARL+HST+SFFD +PET SRWNRVS
Sbjct: 51 VKVQKVYRSYRTRRRLADSVVVAEELWWQAMDYARLNHSTISFFDYSRPETAVSRWNRVS 110
Query: 99 LNASKVGQGLSRDGKALKLAFQHWIEAIDPRHRYGHNLHFYYDVWCQSQAGQPFFYWLDI 158
LNASKVG+GLS KA KLAFQHWIEAIDPRHRYGHNLH YY+ WC++ AGQPFFYWLD+
Sbjct: 111 LNASKVGKGLSIVDKAQKLAFQHWIEAIDPRHRYGHNLHKYYEEWCKADAGQPFFYWLDV 170
Query: 159 GEGKDVDLPECPRARLKKQCIKYLGPQERELYEYIVTEGKIIHKHSGEPLDTSQGPKGTK 218
G G D+DL ECPR++LK+QCI+YLGPQERE YEY++ EGKI+HK +G+ L T G +GTK
Sbjct: 171 GGGIDLDLNECPRSKLKQQCIRYLGPQEREEYEYVIIEGKIVHKLTGKFLHTMHGSEGTK 230
Query: 219 WIFVMSTTKKLYAGKKERGVFQHSSFLAGGATIAAGRFTAENGVIKSIWAYSGHYKPSAE 278
WIFVMST KKLYAG K++G F HSSFLAGGAT+AAGR +NGV+K+I AYSGHY+PS +
Sbjct: 231 WIFVMSTFKKLYAGLKKKGRFHHSSFLAGGATLAAGRVIVDNGVLKTISAYSGHYRPSDD 290
Query: 279 NLANFMNFLEENGVDLKEVEV-RSSTNEDYYEDPVPNKQNPLATVMESNPPQLILPQNMI 337
+L F+ FL EN V+L VEV ++S + D Y+D V K N + P+ +
Sbjct: 291 SLDTFLGFLRENAVNLDNVEVHKASEDSDSYDDYV--KSNGGSE-----------PEPLK 337
Query: 338 EEDKASEPFSQAEGAESDNVPKVQ--TKPTYQRTLSGGLKSPRAADVPREAILERVKSKG 395
+ED + ++ + + V ++ + +YQRTLSGGL SP+ A+VP++++L R+ SK
Sbjct: 338 KEDTTFQAETETDENGNGTVGTLEEAKRSSYQRTLSGGLGSPK-ANVPQKSMLLRINSKK 396
Query: 396 ESKSYQLGHRLSLKWSTGVGPRIGCVKDYPMELRMQALEMVNLSP--RASTPSPSWRL 451
+S+S QLGH+LSLKWSTGVGPRIGC DYP++LR QALE VNLSP R+S SP+ +L
Sbjct: 397 QSRSLQLGHQLSLKWSTGVGPRIGCAADYPVQLRTQALEFVNLSPKYRSSRLSPTGKL 454
>AT3G13600.1 | chr3:4445102-4447383 FORWARD LENGTH=606
Length = 605
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/463 (49%), Positives = 302/463 (65%), Gaps = 57/463 (12%)
Query: 40 KLQKVYRSYRTRRKLADSAVVVEELWWQALDFARLSHSTVSFFDDPKPETVASRWNRVSL 99
KLQKVY+S+RTRRKLAD AV+VE+ WW+ LDFA L S++SFFD K ET SRW+R
Sbjct: 111 KLQKVYKSFRTRRKLADCAVLVEQSWWKLLDFAELKRSSISFFDIEKHETAISRWSRART 170
Query: 100 NASKVGQGLSRDGKALKLAFQHWIEAIDPRHRYGHNLHFYYDVWCQSQAGQPFFYWLDIG 159
A+KVG+GLS++GKA KLA QHW+EAIDPRHRYGHNLHFYY+ W Q+ +PFFYWLDIG
Sbjct: 171 RAAKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHFYYNKWLHCQSREPFFYWLDIG 230
Query: 160 EGKDVDLPE-CPRARLKKQCIKYLGPQERELYEYIVTEGKIIHKHSGEPLDTSQGPKG-T 217
EGK+V+L E CPR +L++QCIKYLGP ER+ YE +V +GK +KHSGE L TS +
Sbjct: 231 EGKEVNLVEKCPRLKLQQQCIKYLGPMERKAYEVVVEDGKFFYKHSGEILQTSDMEDSES 290
Query: 218 KWIFVMSTTKKLYAGKKERGVFQHSSFLAGGATIAAGRFTAENGVIKSIWAYSGHYKPSA 277
KWIFV+ST+K LY GKK++G FQHSSFLAGGAT+AAGR ENGV+K++W +SGHY+P+
Sbjct: 291 KWIFVLSTSKVLYVGKKKKGTFQHSSFLAGGATVAAGRLVVENGVLKAVWPHSGHYQPTE 350
Query: 278 ENLANFMNFLEENGVDLKEVEVRSSTNED----YYEDPVPNKQNPLATVME--------- 324
EN +F++FL EN VD+ +V++ S T+ED Y + + + L +E
Sbjct: 351 ENFMDFLSFLRENDVDITDVKM-SPTDEDEFSIYKQRSTHMRNHSLEEDLEAEKTISFQD 409
Query: 325 ----SNPPQLIL-------PQNMIEEDKASEPFS------QAEGAESDNV---------- 357
S Q ++ Q+ +E + E FS Q+ G++S V
Sbjct: 410 KVDPSGEEQTLMRNESISRKQSDLETPEKMESFSTFGDEIQSVGSKSTKVSEDYDSGDDE 469
Query: 358 --------------PKVQTKPTYQRTLSGGLKSPRAADVPREAILERVKSKGESKSYQLG 403
P Q+ P + G K + E+IL+R+ SK E+KS+QLG
Sbjct: 470 EEEEEMFELEQESMPSEQSSPRGEEKEEGETKESEVVKITEESILKRINSKKETKSFQLG 529
Query: 404 HRLSLKWSTGVGPRIGCVKDYPMELRMQALEMVNLSPRASTPS 446
+LS KW+TG GPRIGCV+DYP EL+ QALE VNLSPR+++ S
Sbjct: 530 KQLSCKWTTGAGPRIGCVRDYPSELQFQALEQVNLSPRSASVS 572
>AT3G58480.1 | chr3:21629341-21631853 FORWARD LENGTH=576
Length = 575
Score = 390 bits (1002), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/449 (46%), Positives = 272/449 (60%), Gaps = 44/449 (9%)
Query: 40 KLQKVYRSYRTRRKLADSAVVVEELWWQALDFARLSHSTVSFFDDPKPETVASRWNRVSL 99
KLQKVYRS+RTRR+LAD AVVVE+ WW+ LDFA L S++SFF+ K ET SRW+R
Sbjct: 101 KLQKVYRSFRTRRRLADCAVVVEQRWWKVLDFAELKRSSISFFEIEKQETAVSRWSRART 160
Query: 100 NASKVGQGLSRDGKALKLAFQHWIEAIDPRHRYGHNLHFYYDVWCQSQAGQPFFYWLDIG 159
A+KVG+GLS+D KA KLA QHW+EAIDPRHRYGHNL FYY W + QPFFYWLDIG
Sbjct: 161 RAAKVGKGLSKDEKARKLALQHWLEAIDPRHRYGHNLQFYYHAWLHCDSKQPFFYWLDIG 220
Query: 160 EGKDVDLPECPRARLKKQCIKYLGPQERELYEYIVTEGKIIHKHSGEPLDTSQGPKGTKW 219
+GK+++ CPR++L +Q IKYLGP ERE YE I+ +GK+++K SG LDT +GP KW
Sbjct: 221 QGKELNHERCPRSKLYQQSIKYLGPTEREAYEVIIEDGKLMYKQSGIVLDTKEGPPDAKW 280
Query: 220 IFVMSTTKKLYAGKKERGVFQHSSFLAGGATIAAGRFTAENGVIKSIWAYSGHYKPSAEN 279
IFV+S +K LY G K++G FQHSSFLAGGAT++AGR ++GV+K++W +SGHY P+ EN
Sbjct: 281 IFVLSVSKILYVGMKKKGNFQHSSFLAGGATLSAGRIVVDDGVLKAVWPHSGHYLPTEEN 340
Query: 280 LANFMNFL---------------EENG---VDLKEVEVRSSTNEDYYEDPV--------- 312
FM+FL EE+G +K + R E+ + D V
Sbjct: 341 FQAFMSFLRENNVDLANVKKNPDEEDGEAPAKVKRMPSRIKETEEEHCDFVDAETGFSPN 400
Query: 313 --PNKQNPLATVMESNPPQLILPQNMIEEDKASEPFSQAEGAESDNVPKVQTKPTYQRTL 370
PN L T+ + L + E+D E + + E P Q T + T
Sbjct: 401 TKPNNHAELQTLSRFHSKLSRLDEIPDEDDNMIE--EEQDDEEEPETPSEQGYETAEETF 458
Query: 371 ---------SGGLKSPRAAD----VPREAILERVKSKGESKSYQLGHRLSLKWSTGVGPR 417
L D V +E I+ R+ S KSYQL RL +WSTG GPR
Sbjct: 459 IAEEEFTYPKSNLFDEDIEDYEKPVLKEKIMRRIDSHKGIKSYQLAERLHSRWSTGAGPR 518
Query: 418 IGCVKDYPMELRMQALEMVNLSPRASTPS 446
I C++DYP EL+ + LE +LSPRAS+ S
Sbjct: 519 ISCMRDYPSELQFRVLEQAHLSPRASSNS 547
>AT2G26190.1 | chr2:11147901-11150082 REVERSE LENGTH=533
Length = 532
Score = 355 bits (910), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 165/269 (61%), Positives = 208/269 (77%), Gaps = 4/269 (1%)
Query: 39 TKLQKVYRSYRTRRKLADSAVVVEELWWQALDFARLSHSTVSFFDDPKPETVASRWNRVS 98
T LQKVY+SYRTRR LAD AVVVEELWW+ LD A L+ S+V+FF++ K ET S+W R
Sbjct: 141 TTLQKVYKSYRTRRNLADCAVVVEELWWKTLDAAALNLSSVAFFEEEKHETAVSKWARAR 200
Query: 99 LNASKVGQGLSRDGKALKLAFQHWIEAIDPRHRYGHNLHFYYDVWCQSQAGQPFFYWLDI 158
A+KVG+GLS+D KA KLA QHW+EAIDPRHRYGHNLHFYYDVW S + QPFFYWLDI
Sbjct: 201 TRAAKVGKGLSKDEKAQKLALQHWLEAIDPRHRYGHNLHFYYDVWSASMSAQPFFYWLDI 260
Query: 159 GEGKDVDLPECPRARLKKQCIKYLGPQERELYEYIVTEGKIIHKHSGEPLDTSQGPKGTK 218
G+GKDV+L PR+ L+KQCIKYLGP ERE YE IV +GK+++K S +++++ K
Sbjct: 261 GDGKDVNLEHHPRSVLQKQCIKYLGPLEREAYEVIVEDGKLMNKQSMTLINSTEDSKS-- 318
Query: 219 WIFVMSTTKKLYAGKKERGVFQHSSFLAGGATIAAGRFTAENGVIKSIWAYSGHYKPSAE 278
IFV+STT+ LY G+K++G FQHSSFL+GGAT AAGR A G++++IW YSGHY P+ +
Sbjct: 319 -IFVLSTTRTLYVGQKKKGRFQHSSFLSGGATTAAGRLVAREGILEAIWPYSGHYLPTED 377
Query: 279 NLANFMNFLEENGVDLKEVEVRSSTNEDY 307
N F++FLEEN VD+ V+ R S NE+Y
Sbjct: 378 NFNEFISFLEENNVDMTNVK-RCSVNEEY 405
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 400 YQLGHRLSLKWSTGVGPRIGCVKDYPMELRMQALEMVNLSPRAS 443
+QL RLS KW++GVGPRIGCV+DYPMEL+ QA E V+LSPR S
Sbjct: 447 FQLAKRLSCKWNSGVGPRIGCVRDYPMELQSQAFEQVSLSPRIS 490
>AT5G57010.1 | chr5:23068207-23070203 FORWARD LENGTH=496
Length = 495
Score = 332 bits (850), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 202/267 (75%), Gaps = 7/267 (2%)
Query: 41 LQKVYRSYRTRRKLADSAVVVEELWWQALDFARLSHSTVSFFDDPKPETVASRWNRVSLN 100
LQKVY+SYRTRR LAD AVVVEELWW+ L+ A+L + + KPE+ SRW R
Sbjct: 138 LQKVYKSYRTRRNLADCAVVVEELWWKELELAKLEPNKT----NDKPESAVSRWARAGTK 193
Query: 101 ASKVGQGLSRDGKALKLAFQHWIEAIDPRHRYGHNLHFYYDVWCQSQAGQPFFYWLDIGE 160
A+KVG+GL +D KA KLA +HW+EAIDPRHRYGHNLH YYDVW +S++ QPFF+WLDIG+
Sbjct: 194 AAKVGKGLLKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYDVWSESESTQPFFFWLDIGD 253
Query: 161 GKDVDLPECPRARLKKQCIKYLGPQERELYEYIVTEGKIIHKHSGEPLDTSQGPKGTKWI 220
GK+V+L +C R L++QCI YLGP+ER+ YE +V +GK++ + + ++T++ GTKWI
Sbjct: 254 GKEVNLNKCSRTLLQRQCITYLGPKERQAYEVVVEDGKLVSRQTKSLVETTE---GTKWI 310
Query: 221 FVMSTTKKLYAGKKERGVFQHSSFLAGGATIAAGRFTAENGVIKSIWAYSGHYKPSAENL 280
FV+STT+KLY G+K++G FQHSSFL+G A AAGR + +GV+K++W YSGHY P+ EN
Sbjct: 311 FVLSTTRKLYIGQKQKGRFQHSSFLSGAAITAAGRIVSHDGVVKAVWPYSGHYLPTEENF 370
Query: 281 ANFMNFLEENGVDLKEVEVRSSTNEDY 307
F+ FL EN V+L V++ + ++D+
Sbjct: 371 REFICFLRENHVNLTNVKMNAIDDDDH 397
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 405 RLSLKWSTGVGPRIGCVKDYPMELRMQALEMVNLSPRA 442
R S KWSTG GPRIGCV+DYPM+L+ +ALE VNLSPR
Sbjct: 422 RFSCKWSTGNGPRIGCVRDYPMDLQTRALEQVNLSPRV 459
>AT4G33050.2 | chr4:15944604-15946736 REVERSE LENGTH=527
Length = 526
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/307 (52%), Positives = 208/307 (67%), Gaps = 42/307 (13%)
Query: 39 TKLQKVYRSYRTRRKLADSAVVVEELWWQALDFARLSHSTVSFFDDPKPETVASRWNRVS 98
T LQKVY+SYRTRR LAD AVVVEELWW+ L+ A L S+VSFF + K ET S+W R
Sbjct: 111 TTLQKVYKSYRTRRNLADCAVVVEELWWRTLEGAALDLSSVSFFGEEKHETAVSKWARAR 170
Query: 99 LNASKVGQGLSRDGKALKLAFQHWIEA--------------------------------- 125
A+KVG+GLS+D KA KLA QHW+EA
Sbjct: 171 KRAAKVGKGLSKDEKAQKLALQHWLEAVSPHNLNIFVTSYQRQVPYLTSKAIIEYTLMIH 230
Query: 126 -----IDPRHRYGHNLHFYYDVWCQSQAGQPFFYWLDIGEGKDVDLPECPRARLKKQCIK 180
IDPRHRYGHNLHFYYDVW S++ QPFFYWLDIG+GKDV+L + PR+ L+KQCI+
Sbjct: 231 LLKLQIDPRHRYGHNLHFYYDVWSASKSTQPFFYWLDIGDGKDVNLEKHPRSVLQKQCIR 290
Query: 181 YLGPQERELYEYIVTEGKIIHKHSGEPLDTSQGPKGTKWIFVMSTTKKLYAGKKERGVFQ 240
YLGP ERE YE IV +G++++K +++++ K IFV+STT+ LY G K++G+FQ
Sbjct: 291 YLGPMEREAYEVIVEDGRLMYKQGMTLINSTEEAKS---IFVLSTTRNLYVGIKKKGLFQ 347
Query: 241 HSSFLAGGATIAAGRFTAENGVIKSIWAYSGHYKPSAENLANFMNFLEENGVDLKEVEVR 300
HSSFL+GGAT AAGR A +G++++IW YSGHY P+ +N F++FLEE+ VDL V+ R
Sbjct: 348 HSSFLSGGATTAAGRLVARDGILEAIWPYSGHYLPTEDNFKEFISFLEEHNVDLTNVK-R 406
Query: 301 SSTNEDY 307
S NE+Y
Sbjct: 407 CSVNEEY 413
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 405 RLSLKWSTGVGPRIGCVKDYPMELRMQALEMVNLSPRAS 443
RLS KW++G GPRIGCV+DYPMEL+ QALE V+LSPR S
Sbjct: 452 RLSCKWTSGYGPRIGCVRDYPMELQAQALEQVSLSPRVS 490
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,482,489
Number of extensions: 459238
Number of successful extensions: 1125
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1117
Number of HSP's successfully gapped: 11
Length of query: 477
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 375
Effective length of database: 8,310,137
Effective search space: 3116301375
Effective search space used: 3116301375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)