Os12g0147200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0147200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 352.32 | 0.882 | 8.24 | 0.18 | 0.76 | 3.01 | 2.3 | 0.762 | -0.39 | 18.3 | 21.32 | 1392 | -- | -- |
| 350.05 | 0.871 | 8.25 | 0.0315 | 0.789 | 3.07 | 2.3 | -- | -0.393 | 17.7 | 22.36 | 1316 | -- | -- |
| 364.49 | 0.889 | 8.24 | 0.249 | 0.758 | 2.95 | -- | 0.824 | -0.378 | 18.6 | 21.77 | 1406 | -- | -- |
| 363.48 | 0.888 | 8.25 | -0.0108 | 0.792 | 3.01 | -- | -- | -0.393 | 18.1 | 22.3 | 1340 | -- | -- |
| 365.06 | 0.89 | 8.19 | 0.376 | -- | 3.17 | -- | 1.57 | -0.3 | -- | 21.96 | 1965 | -- | -- |
| 676.23 | 1.22 | 8.1 | 1.07 | 0.676 | -- | 1.76 | -- | 0.266 | 19.5 | -- | -- | -- | -- |
| 684.22 | 1.22 | 8.1 | 1.02 | 0.677 | -- | -- | -- | 0.267 | 20.1 | -- | -- | -- | -- |
| 365 | 0.89 | 8.23 | -0.0873 | -- | 3.31 | -- | -- | -0.412 | -- | 22.39 | 1962 | -- | -- |
| 363.49 | 0.888 | 8.25 | -- | 0.793 | 3 | -- | -- | -0.388 | 18.1 | 22.33 | 1340 | -- | -- |
| 709.33 | 1.24 | 8.08 | 1.01 | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
| 711.67 | 1.25 | 8.12 | -- | 0.671 | -- | -- | -- | 0.153 | 20.2 | -- | -- | -- | -- |
| 365.23 | 0.89 | 8.23 | -- | -- | 3.29 | -- | -- | -0.402 | -- | 22.4 | 1966 | -- | -- |
| 736.46 | 1.27 | 8.11 | -- | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 354.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 16 |
| 22 | 355.71 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 36 | 356.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 42 | 356.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 156 | 358.03 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 228 | 359.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 233 | 359.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 913 | 367.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 963 | 368.25 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |