Os12g0144000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0144000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.81 | 0.369 | 11.4 | -0.489 | 0.374 | -0.663 | -0.0393 | -0.771 | -0.203 | 9.24 | 21.8 | 2310 | -- | -- |
| 62.98 | 0.37 | 11.4 | -0.299 | 0.398 | -0.595 | 0.148 | -- | -0.156 | 8.98 | 21.9 | 2482 | -- | -- |
| 61.81 | 0.366 | 11.4 | -0.488 | 0.374 | -0.663 | -- | -0.763 | -0.202 | 9.19 | 21.76 | 2315 | -- | -- |
| 62.94 | 0.37 | 11.4 | -0.299 | 0.391 | -0.595 | -- | -- | -0.149 | 9.07 | 22.1 | 2473 | -- | -- |
| 69.83 | 0.389 | 11.4 | -0.454 | -- | -0.733 | -- | -0.781 | -0.181 | -- | 21.6 | 2294 | -- | -- |
| 74.92 | 0.406 | 11.4 | -0.563 | 0.422 | -- | 0.0302 | -- | -0.348 | 9.45 | -- | -- | -- | -- |
| 74.92 | 0.405 | 11.4 | -0.562 | 0.422 | -- | -- | -- | -0.348 | 9.48 | -- | -- | -- | -- |
| 71.25 | 0.393 | 11.4 | -0.269 | -- | -0.657 | -- | -- | -0.129 | -- | 21.9 | 2315 | -- | -- |
| 64.88 | 0.375 | 11.4 | -- | 0.416 | -0.642 | -- | -- | -0.0854 | 9.49 | 22 | 3728 | -- | -- |
| 85.37 | 0.432 | 11.4 | -0.565 | -- | -- | -- | -- | -0.347 | -- | -- | -- | -- | -- |
| 83.25 | 0.427 | 11.4 | -- | 0.422 | -- | -- | -- | -0.286 | 9.58 | -- | -- | -- | -- |
| 72.42 | 0.396 | 11.4 | -- | -- | -0.778 | -- | -- | -0.0836 | -- | 21.5 | 2316 | -- | -- |
| 93.79 | 0.452 | 11.4 | -- | -- | -- | -- | -- | -0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 3 | 61.38 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 4 | 61.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 6 | 61.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 7 | 61.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 10 | 61.73 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 13 | 61.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 77 | 62.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 96 | 62.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 139 | 62.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 9 |
| 176 | 62.32 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 199 | 62.37 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 244 | 62.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 268 | 62.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 269 | 62.50 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 337 | 62.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 349 | 62.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 398 | 62.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 444 | 62.83 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 473 | 62.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 509 | 62.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 518 | 62.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 536 | 62.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 543 | 62.98 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 570 | 63.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 616 | 63.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 669 | 63.16 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 758 | 63.26 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 828 | 63.34 | temperature | 20 | 270 | > th | dose dependent | sin | 5 | NA |
| 858 | 63.37 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 887 | 63.40 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 904 | 63.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 933 | 63.44 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 998 | 63.51 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 1 |