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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0143800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Disrupted meiotic cDNA 1 protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.61 (0.0628) R2 : 0.728
β1 : 3.18 (0.242) R2dD : 0.126 R2D : -0.0835
β2 : 4.11 (0.146) R2dC : 0.472 R2C : 0.412
β3 : -3.66 (0.205) R2dE : 0.268 R2E : -0.102
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 2.42 (0.148) R2dN8 : 0.278 R2N8 : -0.0254
σ : 1.14
deviance : 595.15
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_____
C
peak time of C : 1.62
E
wheather : temperature
threshold : 26.4
memory length : 7410
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 23.5
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
611.6 1.16 6.57 3.84 4.04 -3.91 0.175 2.57 2.35 1.62 26.92 5982 22.9 --
595.15 1.14 6.61 3.18 4.12 -3.66 0.0602 -- 2.42 1.63 26.34 7402 23.5 --
610.73 1.15 6.58 3.92 4.03 -4.02 -- 2.84 2.36 1.63 26.9 5982 23.4 --
595.15 1.14 6.61 3.18 4.11 -3.66 -- -- 2.42 1.62 26.4 7410 23.5 --
946.28 1.43 6.56 3.19 -- -4.6 -- 5.1 2.06 -- 19.4 399 20.3 --
1012.48 1.49 6.9 1.48 4.07 -- -0.155 -- 1.16 1.56 -- -- -- --
1012.57 1.49 6.9 1.48 4.07 -- -- -- 1.16 1.56 -- -- -- --
864.54 1.37 6.74 2.39 -- -4.58 -- -- 1.73 -- 21.34 325 19.6 --
798.93 1.32 6.77 -- 4.25 -2.47 -- -- 1.63 1.61 26.4 7462 3.04 --
2026.42 2.1 6.85 1.65 -- -- -- -- 1.25 -- -- -- -- --
1070.53 1.53 6.93 -- 4.1 -- -- -- 0.995 1.57 -- -- -- --
993.37 1.47 6.83 -- -- -4.39 -- -- 1.32 -- 20.5 314 19.5 --
2097.89 2.14 6.89 -- -- -- -- -- 1.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 595.47 temperature 20 14400 > th dose dependent rect. 17 1
2 598.74 temperature 10 14400 > th dose dependent rect. 17 1
10 603.21 temperature 30 14400 < th dose dependent rect. 17 1
38 608.91 wind 3 43200 > th dose dependent rect. 6 1
160 618.21 temperature 30 14400 < th dose dependent rect. 21 1
163 618.32 temperature 10 14400 > th dose dependent rect. 21 1
215 620.59 temperature 20 14400 > th dose dependent sin 18 NA
233 621.01 temperature 10 14400 > th dose dependent sin 18 NA
350 623.58 temperature 25 14400 < th dose independent rect. 13 10
406 624.49 temperature 25 14400 > th dose independent rect. 13 10
413 624.62 temperature 30 14400 < th dose dependent sin 18 NA
424 624.74 temperature 25 14400 < th dose independent rect. 10 14
481 625.41 humidity 80 14400 > th dose dependent rect. 21 1
514 625.81 temperature 25 14400 < th dose independent sin 18 NA
516 625.82 humidity 70 14400 > th dose dependent rect. 18 1
525 625.87 temperature 25 14400 > th dose independent rect. 10 14
598 626.57 temperature 20 1440 > th dose dependent rect. 7 2
625 626.80 temperature 25 14400 < th dose independent rect. 4 19
631 626.88 temperature 25 14400 < th dose independent rect. 7 17
645 627.01 temperature 25 14400 > th dose independent sin 18 NA
765 627.92 temperature 25 14400 > th dose independent rect. 4 19
785 628.07 temperature 25 14400 < th dose independent rect. 10 19
799 628.14 humidity 90 14400 < th dose independent rect. 17 9
840 628.39 temperature 25 14400 > th dose independent rect. 10 19
843 628.40 humidity 90 14400 < th dose independent rect. 21 2
848 628.43 temperature 25 14400 < th dose independent rect. 10 22
851 628.44 wind 5 43200 < th dose independent rect. 6 1
857 628.48 temperature 25 14400 > th dose independent rect. 7 17
897 628.66 temperature 25 14400 > th dose independent rect. 10 22
904 628.74 temperature 30 14400 < th dose independent rect. 15 1
968 629.12 temperature 10 14400 > th dose dependent rect. 13 22