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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0135500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Alpha/beta hydrolase fold-3 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.41 (0.0272) R2 : 0.00352
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0726 (0.0572) R2dN8 : 0.00455 R2N8 : 0.00352
σ : 0.512
deviance : 120.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.18 0.5 3.37 0.113 0.231 0.499 -0.345 -0.472 0.186 11.4 28.87 168 -- --
113.37 0.496 3.38 0.033 0.222 0.516 -0.251 -- 0.173 11.2 27.46 183 -- --
113.61 0.496 3.38 0.0667 0.225 0.51 -- -0.236 0.18 11.2 28.13 188 -- --
113.65 0.497 3.38 0.0173 0.226 0.501 -- -- 0.167 11 27.52 182 -- --
114.43 0.498 3.37 0.127 -- 0.492 -- -0.544 0.199 -- 29.51 692 -- --
117.02 0.507 3.41 -0.104 0.215 -- -0.231 -- 0.0587 8.82 -- -- -- --
117.19 0.507 3.41 -0.112 0.217 -- -- -- 0.0583 8.6 -- -- -- --
114.74 0.499 3.39 0.04 -- 0.549 -- -- 0.173 -- 28.9 680 -- --
113.66 0.497 3.38 -- 0.225 0.494 -- -- 0.164 11 27.51 182 -- --
119.85 0.512 3.41 -0.111 -- -- -- -- 0.0602 -- -- -- -- --
117.52 0.507 3.4 -- 0.217 -- -- -- 0.0708 8.64 -- -- -- --
114.78 0.499 3.39 -- -- 0.534 -- -- 0.166 -- 29 677 -- --
120.17 0.512 3.41 -- -- -- -- -- 0.0726 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 105.17 radiation 10.0 10 > th dose independent rect. 6 1
27 105.17 radiation 10.0 10 > th dose dependent rect. 6 1
55 108.36 atmosphere 1005.0 30 > th dose dependent rect. 6 1
56 108.43 wind 3.0 30 < th dose dependent rect. 6 1
60 109.83 humidity 80.0 30 > th dose dependent rect. 6 1
65 110.16 atmosphere 1005.0 30 > th dose dependent rect. 14 1
66 110.17 humidity 60.0 30 > th dose independent rect. 14 1
68 110.20 temperature 30.0 30 < th dose independent rect. 14 1
69 110.23 temperature 30.0 30 < th dose dependent rect. 6 1
71 110.26 temperature 10.0 1440 > th dose independent rect. 15 1
76 110.26 atmosphere 1005.0 30 > th dose independent rect. 14 1
77 110.26 radiation 40.0 30 < th dose independent rect. 14 1
78 110.26 temperature 10.0 1440 > th dose independent rect. 16 23
82 110.29 wind 7.0 30 < th dose independent rect. 14 1
84 110.31 wind 3.0 30 < th dose independent rect. 6 1
85 110.32 radiation 10.0 30 > th dose independent rect. 14 1
87 110.33 temperature 10.0 30 > th dose independent rect. 14 1
89 110.33 atmosphere 995.0 30 > th dose independent rect. 14 1
90 110.33 atmosphere 1010.0 30 < th dose independent rect. 14 1
93 110.33 precipitation 0.1 30 < th dose independent rect. 14 1
94 110.33 temperature 10.0 30 > th dose independent rect. 15 23
95 110.33 precipitation 0.1 30 < th dose dependent rect. 14 1
97 110.37 humidity 50.0 30 > th dose dependent rect. 14 1
98 110.38 wind 1.0 30 > th dose independent rect. 14 1
100 110.38 temperature 10.0 30 > th dose dependent rect. 14 1
103 110.40 wind 9.0 30 < th dose dependent rect. 14 1
104 110.41 humidity 70.0 30 < th dose independent rect. 14 1
109 110.42 radiation 1.0 30 > th dose dependent rect. 14 1
112 110.47 wind 1.0 30 > th dose dependent rect. 14 1
119 110.55 atmosphere 1015.0 30 < th dose dependent rect. 14 1
122 110.61 humidity 90.0 30 < th dose dependent rect. 14 1
124 110.66 temperature 25.0 10 > th dose independent rect. 6 1
125 110.67 wind 9.0 1440 < th dose independent rect. 7 1
126 110.67 temperature 10.0 1440 > th dose independent rect. 7 1
130 110.67 temperature 30.0 1440 < th dose independent rect. 7 1
134 110.67 humidity 50.0 1440 > th dose independent rect. 7 1
139 110.67 atmosphere 995.0 1440 > th dose independent rect. 7 1
140 110.67 atmosphere 1015.0 1440 < th dose independent rect. 7 1
141 110.67 temperature 10.0 1440 > th dose independent rect. 8 23
149 110.76 humidity 90.0 30 < th dose independent rect. 6 1
153 110.89 atmosphere 1005.0 30 > th dose independent rect. 6 1
156 110.98 wind 1.0 30 > th dose independent rect. 6 1
157 110.98 humidity 80.0 30 > th dose independent rect. 6 1
163 111.01 temperature 10.0 30 > th dose independent rect. 6 1
165 111.01 temperature 30.0 30 < th dose independent rect. 6 1
166 111.01 humidity 50.0 30 > th dose independent rect. 6 1
171 111.01 atmosphere 1015.0 30 < th dose independent rect. 6 1
172 111.01 radiation 20.0 30 < th dose independent rect. 6 1
175 111.01 precipitation 0.1 30 < th dose independent rect. 6 1
176 111.01 temperature 10.0 30 > th dose independent rect. 7 23
177 111.01 precipitation 0.1 30 < th dose dependent rect. 6 1
186 111.21 wind 9.0 30 < th dose independent rect. 7 23
189 111.30 temperature 10.0 30 > th dose dependent rect. 6 1
202 111.55 radiation 40.0 30 < th dose dependent rect. 6 1
220 111.67 temperature 10.0 90 > th dose dependent rect. 7 23
266 112.15 wind 9.0 30 < th dose independent rect. 15 23
267 112.15 temperature 25.0 1440 > th dose dependent rect. 8 1
268 112.15 temperature 25.0 1440 > th dose dependent rect. 24 10
272 112.18 temperature 25.0 1440 > th dose dependent rect. 22 13
298 112.32 temperature 25.0 1440 > th dose dependent rect. 7 3
307 112.39 temperature 10.0 1440 > th dose dependent rect. 22 1
308 112.39 temperature 30.0 1440 < th dose dependent rect. 22 1
315 112.42 humidity 90.0 43200 > th dose dependent rect. 13 2
327 112.51 temperature 25.0 1440 > th dose dependent sin 8 NA
333 112.53 temperature 10.0 1440 > th dose dependent rect. 21 4
336 112.53 temperature 30.0 1440 < th dose dependent rect. 21 5
342 112.54 temperature 30.0 270 < th dose dependent rect. 9 22
370 112.60 temperature 25.0 1440 > th dose independent rect. 8 1
381 112.63 wind 3.0 43200 > th dose dependent rect. 19 2
385 112.63 temperature 30.0 30 < th dose dependent rect. 5 23
386 112.64 radiation 1.0 14400 > th dose independent rect. 10 7
393 112.65 radiation 1.0 14400 > th dose independent rect. 8 9
396 112.66 radiation 1.0 14400 < th dose independent rect. 10 7
397 112.66 radiation 1.0 14400 < th dose independent rect. 8 9
410 112.67 temperature 15.0 1440 > th dose dependent rect. 1 1
416 112.67 radiation 1.0 14400 < th dose dependent rect. 9 8
420 112.68 wind 7.0 43200 < th dose dependent rect. 19 2
461 112.70 temperature 15.0 90 > th dose dependent rect. 15 23
462 112.71 wind 5.0 43200 > th dose independent rect. 16 7
466 112.71 temperature 30.0 1440 < th dose dependent rect. 1 1
475 112.72 wind 3.0 14400 > th dose independent rect. 10 1
489 112.73 wind 5.0 43200 < th dose independent rect. 16 7
531 112.75 wind 5.0 43200 > th dose independent rect. 10 15
539 112.75 humidity 80.0 14400 < th dose dependent rect. 3 6
546 112.76 wind 5.0 14400 < th dose independent rect. 11 1
547 112.76 humidity 70.0 14400 < th dose independent rect. 8 1
552 112.76 wind 5.0 43200 < th dose independent rect. 10 15
605 112.80 temperature 15.0 10 > th dose dependent rect. 15 23
606 112.81 wind 5.0 43200 < th dose independent rect. 11 4
607 112.81 temperature 25.0 1440 > th dose independent rect. 2 9
640 112.84 temperature 20.0 4320 > th dose independent rect. 22 1
653 112.84 wind 3.0 43200 > th dose dependent rect. 17 5
661 112.85 wind 5.0 43200 > th dose independent rect. 11 4
683 112.86 wind 5.0 43200 > th dose independent sin 18 NA
761 112.89 wind 5.0 43200 < th dose independent rect. 19 2
779 112.90 wind 5.0 43200 < th dose independent sin 18 NA
780 112.90 humidity 70.0 14400 > th dose independent rect. 4 5
790 112.90 temperature 10.0 1440 > th dose dependent rect. 4 1
806 112.91 temperature 30.0 4320 < th dose independent rect. 10 5
842 112.92 temperature 30.0 4320 < th dose independent rect. 7 8
896 112.94 temperature 25.0 14400 > th dose independent rect. 10 1
897 112.94 atmosphere 1015.0 14400 > th dose independent rect. 23 2
898 112.94 atmosphere 1015.0 14400 < th dose independent rect. 23 2
902 112.94 temperature 25.0 1440 > th dose independent rect. 21 14
907 112.94 humidity 80.0 43200 < th dose dependent rect. 8 1
917 112.95 wind 9.0 14400 > th dose independent rect. 16 1
933 112.95 wind 5.0 43200 > th dose independent rect. 9 9
965 112.96 temperature 25.0 14400 < th dose independent rect. 10 1
966 112.96 radiation 1.0 14400 > th dose independent rect. 11 2
997 112.96 temperature 30.0 1440 < th dose dependent rect. 4 1
998 112.96 humidity 90.0 10 < th dose dependent rect. 6 1