BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0135500 Os12g0135500|Os12g0135500
(327 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16080.1 | chr5:5252533-5253567 REVERSE LENGTH=345 102 3e-22
AT5G06570.1 | chr5:2008075-2011013 REVERSE LENGTH=330 96 2e-20
AT1G68620.1 | chr1:25766018-25767028 FORWARD LENGTH=337 90 1e-18
AT5G27320.1 | chr5:9629254-9630746 FORWARD LENGTH=345 74 1e-13
AT5G62180.1 | chr5:24978866-24979849 REVERSE LENGTH=328 74 2e-13
AT3G63010.1 | chr3:23289717-23290998 FORWARD LENGTH=359 72 4e-13
AT2G45610.1 | chr2:18791463-18792437 FORWARD LENGTH=325 70 2e-12
AT2G45600.1 | chr2:18789799-18790788 FORWARD LENGTH=330 64 8e-11
AT5G23530.1 | chr5:7933366-7934373 REVERSE LENGTH=336 62 3e-10
AT3G05120.1 | chr3:1430682-1432287 FORWARD LENGTH=346 62 4e-10
AT3G27320.1 | chr3:10090307-10092391 FORWARD LENGTH=461 54 1e-07
>AT5G16080.1 | chr5:5252533-5253567 REVERSE LENGTH=345
Length = 344
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 145/343 (42%), Gaps = 63/343 (18%)
Query: 16 VVEEITGWLRLYSDGTVERLTPPGAEPFTVIVPPYTEPRNGVTVHDVTTAR--------- 66
VVEEI G +++++DG VER P IV P P + T D+ +
Sbjct: 28 VVEEIEGLIKVFNDGCVER------PPIVPIVSPTIHPSSKATAFDIKLSNDTWTRVYIP 81
Query: 67 --------------------GSIVGSLPQLLRASLTTKLDVAG---IVSVFLPLAPEHRL 103
G VGS T L V IVSV LAPEHRL
Sbjct: 82 DAAAASPSVTLPLLVYFHGGGFCVGSAAWSCYHDFLTSLAVKARCVIVSVNYRLAPEHRL 141
Query: 104 PAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEADFARVFLIGDSSGGNXX 163
PAA D G + WL + + + G + + + + VFL GDS+G N
Sbjct: 142 PAAYDDGVNVVSWLV-----KQQISTGGGY------PSWLSKCNLSNVFLAGDSAGANIA 190
Query: 164 XXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSELE--NPPSLFLTEEMVDK 221
+ L G +L++P F E ++ SE + + S LT D
Sbjct: 191 YQVAVRIMASGKYANT----LHLKGIILIHPFFGGESRTSSEKQQHHTKSSALTLSASDA 246
Query: 222 LLALGVPLGMNKDSPYTSPSLAAEAVARLHMPPMLLMVAEKDLLHDPQVEYGEAMARVGK 281
L +P G ++D P+ +P L + A A+L P ++ +AE D+L + +E + M GK
Sbjct: 247 YWRLALPRGASRDHPWCNP-LMSSAGAKL--PTTMVFMAEFDILKERNLEMCKVMRSHGK 303
Query: 282 TVETVVSRGAVAHVFYLNFFAVESDPLTAERTRELIDTIKTFI 324
VE +V G V H F++ +++ ++ +R +++ + FI
Sbjct: 304 RVEGIV-HGGVGHAFHI----LDNSSVSRDRIHDMMCRLHNFI 341
>AT5G06570.1 | chr5:2008075-2011013 REVERSE LENGTH=330
Length = 329
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 72 SLPQLLRASLTTKLDV-AGIVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNG 130
S P LT + A +VS LAPEHRLPAA + A L WL D A ++G
Sbjct: 93 SWPHFHNFCLTLASSLNALVVSPDYRLAPEHRLPAAFEDAEAVLTWLWDQAV-----SDG 147
Query: 131 AAHHLDPAVERLRDEADFARVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGV 190
H + + DF RVF++GDSSGGN PVR+ G V
Sbjct: 148 VNHWFEDGT-----DVDFDRVFVVGDSSGGN----IAHQLAVRFGSGSIELTPVRVRGYV 198
Query: 191 LLNPGFAREDKSRSELENPPSLFLTEEMVDKLLALGVPLGMNKD----SPY--TSPSLAA 244
L+ P F E+++ SE P L+ +++DK L +P G +D +P+ TSP+L +
Sbjct: 199 LMGPFFGGEERTNSE-NGPSEALLSLDLLDKFWRLSLPNGATRDHHMANPFGPTSPTLES 257
Query: 245 EAVARLHMPPMLLMVAEKDLLHDPQVEYGEAMARVGKTVETVVSRGAVAHVFYLNF 300
+ + PML++V +LL D EY + ++G + H FY N+
Sbjct: 258 -----ISLEPMLVIVGGSELLRDRAKEYAYKLKKMGGKRVDYIEFENKEHGFYSNY 308
>AT1G68620.1 | chr1:25766018-25767028 FORWARD LENGTH=337
Length = 336
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 148/364 (40%), Gaps = 81/364 (22%)
Query: 4 TTTAPE-TDPSKTVVEEITGWLRLYSDGTVERLTPPGAEPFTVIVPPYTEPRNGVTVHDV 62
TTT P ++ VV+E+ G +++Y DG VER V P GVT DV
Sbjct: 10 TTTNPNNSNIHGPVVDEVEGLIKVYKDGHVER------SQLLPCVDPSLPLELGVTCSDV 63
Query: 63 ----------------TTARGSI---------------VGSLPQLLRASLTTKLDVAG-- 89
TT + S+ VGS L +L
Sbjct: 64 VIDKLTNVWARLYVPMTTTKSSVSKLPLIVYFHGGGFCVGSASWLCYHEFLARLSARSRC 123
Query: 90 -IVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEADF 148
++SV LAPE+ LPAA + G A+LWL + N+N A + DF
Sbjct: 124 LVMSVNYRLAPENPLPAAYEDGVNAILWL-----NKARNDNLWA-----------KQCDF 167
Query: 149 ARVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSE--L 206
R+FL GDS+GGN +++ G +L+ P ++ E+++ SE +
Sbjct: 168 GRIFLAGDSAGGNIAQQVAARLASPEDLA------LKIEGTILIQPFYSGEERTESERRV 221
Query: 207 ENPPSLFLTEEMVDKLLALGVPLGMNKDSPYTSPS---LAAEAVARLHMPPMLLMVAEKD 263
N + LT D + +P G N++ PY P + + V R L+ VAE D
Sbjct: 222 GNDKTAVLTLASSDAWWRMSLPRGANREHPYCKPVKMIIKSSTVTR-----TLVCVAEMD 276
Query: 264 LLHDPQVEYGEAMARVGKTVETVVSRGAVAHVFYLNFFAVESDPLTAERTRELIDTIKTF 323
LL D +E + V ++ V+ +G V H F++ + L T E++ I F
Sbjct: 277 LLMDSNMEMCDGNEDV---IKRVLHKG-VGHAFHI----LGKSQLAHTTTLEMLCQIDAF 328
Query: 324 IDRY 327
I Y
Sbjct: 329 IHHY 332
>AT5G27320.1 | chr5:9629254-9630746 FORWARD LENGTH=345
Length = 344
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 88 AGIVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEAD 147
A +VSV APE+R P A D G A L W+ + LR + D
Sbjct: 138 AVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSSW-------------------LRSKKD 178
Query: 148 F-ARVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSEL 206
R+FL GDSSGGN + + G +LLNP F +++ SE
Sbjct: 179 SKVRIFLAGDSSGGNIVHNVAVRAVESR---------IDVLGNILLNPMFGGTERTESEK 229
Query: 207 ENPPSLFLTEEMVDKLLALGVPLGMNKDSPYTSP-SLAAEAVARLHMPPMLLMVAEKDLL 265
F+T D +P G +++ P SP ++++ L P L++VA DL+
Sbjct: 230 RLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLI 289
Query: 266 HDPQVEYGEAMARVGKTVETVVSRGAVAHVFYL---NFFAVESDPLTA 310
D Q++Y E + + G+ V+ + A + L N F D + A
Sbjct: 290 QDWQLKYAEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAA 337
>AT5G62180.1 | chr5:24978866-24979849 REVERSE LENGTH=328
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 37/242 (15%)
Query: 88 AGIVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEAD 147
A +VS LAPEHRLPAA D G AL W++ +D E ++ AD
Sbjct: 114 AIVVSPSYRLAPEHRLPAAYDDGVEALDWIK---TSDD--------------EWIKSHAD 156
Query: 148 FARVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSELE 207
F+ VFL+G S+GGN P+++ G +L +P F E++S SE+
Sbjct: 157 FSNVFLMGTSAGGN----LAYNVGLRSVDSVSDLSPLQIRGLILHHPFFGGEERSESEIR 212
Query: 208 NPPSLFLTEEMVDKLLALGVPLGMNKDSPYTSPSLA-----AEAVARLHMPPMLLMVAEK 262
+ D + L +P+G+++D Y++P++ E + RL M++ E
Sbjct: 213 LMNDQVCPPIVTDVMWDLSLPVGVDRDHEYSNPTVGDGSEKLEKIGRLRWKVMMIG-GED 271
Query: 263 DLLHDPQVEYGEAMARVGKTVETVVSRGAVAHVFYLNFFAVESDPLTAERTRELIDTIKT 322
D + D Q + + M + G V + G V A DP + + L +IK
Sbjct: 272 DPMIDLQKDVAKLMKKKGVEVVEHYTGGHVHG-------AEIRDP---SKRKTLFLSIKN 321
Query: 323 FI 324
FI
Sbjct: 322 FI 323
>AT3G63010.1 | chr3:23289717-23290998 FORWARD LENGTH=359
Length = 358
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 90 IVSVFLPLAPEHRLPAAIDAGHAALLWLRD---VACGEDENNNGAAHHLDPAVERLRDEA 146
+VSV +PEHR P A D G AL W++ + G+D N
Sbjct: 142 VVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSN------------------- 182
Query: 147 DFARVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSEL 206
V+L GDSSGGN V++ G +LL+P F +++++SE
Sbjct: 183 --VYVYLAGDSSGGNIAHNVAVRATNEG---------VKVLGNILLHPMFGGQERTQSEK 231
Query: 207 ENPPSLFLTEEMVDKLLALGVPLGMNKDSPYTSP-SLAAEAVARLHMPPMLLMVAEKDLL 265
F+T + D +P G ++D P +P +++ ++ P L++VA DL+
Sbjct: 232 TLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLV 291
Query: 266 HDPQVEYGEAMARVGKTVETVVSRGAVAHVFYL 298
D Q+ Y + + + G V + + A ++L
Sbjct: 292 QDWQLAYVDGLKKTGLEVNLLYLKQATIGFYFL 324
>AT2G45610.1 | chr2:18791463-18792437 FORWARD LENGTH=325
Length = 324
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 101/239 (42%), Gaps = 34/239 (14%)
Query: 90 IVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEADFA 149
+VSV L PEHRLPA D ALLW++ ++ NG L+D ADF+
Sbjct: 115 VVSVHYRLPPEHRLPAQYDDALDALLWVKQQVV---DSTNGEPW--------LKDYADFS 163
Query: 150 RVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSELENP 209
R ++ G S+G N P+++ G V P F + +++SEL+N
Sbjct: 164 RCYICGSSNGANIAFQLALRSLDHDLT------PLQIDGCVFYQPLFGGKTRTKSELKNF 217
Query: 210 PSLFLTEEMVDKLLALGVPLGMNKDSPYTSP---SLAAEAVARLHMPPMLLMVAEKDLLH 266
+ VD + L +P+G+++D Y +P E V RL L++ D
Sbjct: 218 ADPVMPVPAVDAMWELSLPVGVDRDHRYCNPLGYLPQKEKVGRLGR--CLVIGYGGDTSL 275
Query: 267 DPQVEYGEAMARVGKTVETVVSRGAVAHVFYLNFFAVE-SDPLTAERTRELIDTIKTFI 324
D Q ++ + G VE F ++E DP R L++ I+ FI
Sbjct: 276 DRQQDFVNLLVAAGVRVEARFDDAG--------FHSIELVDP---RRAVALLNMIRDFI 323
>AT2G45600.1 | chr2:18789799-18790788 FORWARD LENGTH=330
Length = 329
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 98/238 (41%), Gaps = 27/238 (11%)
Query: 90 IVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEADFA 149
I+SV LAPEHRLPAA + A+LWLRD A G N G L+D DF+
Sbjct: 102 ILSVEYRLAPEHRLPAAYEDAVEAILWLRDQARG--PINGGDCDTW------LKDGVDFS 153
Query: 150 RVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSELENP 209
+ +++G SSGGN PV++ G ++ F + S SE
Sbjct: 154 KCYVMGSSSGGN------IVYNVALRVVDTDLSPVKIQGLIMNQAFFGGVEPSDSESRLK 207
Query: 210 PSLFLTEEMVDKLLALGVPLGMNKDSPYTSPSLAAEAVARLHM---PPMLLMVAEKDLLH 266
L +L +P G+++D Y++P ++ + M P L+ D L
Sbjct: 208 DDKICPLPATHLLWSLCLPDGVDRDHVYSNPIKSSGPQEKDKMGRFPSTLINGYGGDPLV 267
Query: 267 DPQVEYGEAMARVGKTVETVVSRGAVAHVFYLNFFAVESDPLTAERTRELIDTIKTFI 324
D Q E + G VET + F A E + + L +T++ F+
Sbjct: 268 DRQRHVAEMLKGRGVHVETRFDKDG--------FHACEL--FDGNKAKALYETVEAFM 315
>AT5G23530.1 | chr5:7933366-7934373 REVERSE LENGTH=336
Length = 335
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 88 AGIVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEAD 147
A ++SV LAPEHR PA D G AL ++ E N+G+ L AD
Sbjct: 121 AYVISVNYRLAPEHRYPAQYDDGFDALKYI--------EENHGSI---------LPANAD 163
Query: 148 FARVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSELE 207
+R F GDS+GGN V+L G + + P F E+++ +E +
Sbjct: 164 LSRCFFAGDSAGGNIAHNVAIRICREPRSSFTA---VKLIGLISIQPFFGGEERTEAEKQ 220
Query: 208 NPPSLFLTEEMVDKLLALGVPLGMNKDSPYTS---PSLAAEAVARLHMPPMLLMVAEKDL 264
+ ++ + D +G+N+D + P+ A ++ L P +++VA D
Sbjct: 221 LVGAPLVSPDRTDWCWK---AMGLNRDHEAVNVGGPN--AVDISGLDYPETMVVVAGFDP 275
Query: 265 LHDPQVEYGEAMARVGKTVETVVSRGAVAHVFYLNFFAVESDPLTAERTRELIDTIKTFI 324
L D Q Y E + GK T++ + H FY+ P E +LI IK F+
Sbjct: 276 LKDWQRSYYEWLKLCGKKA-TLIEYPNMFHAFYIF-------PELPE-AGQLIMRIKDFV 326
Query: 325 D 325
D
Sbjct: 327 D 327
>AT3G05120.1 | chr3:1430682-1432287 FORWARD LENGTH=346
Length = 345
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 90 IVSVFLPLAPEHRLPAAIDAGHAALLWLRDVACGEDENNNGAAHHLDPAVERLRDEADFA 149
+VSV APE+ P A D G AL W+ + + + ++
Sbjct: 142 VVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKV------------------ 183
Query: 150 RVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGGVLLNPGFAREDKSRSELENP 209
+FL GDSSGGN + + G +LLNP F +++ SE
Sbjct: 184 HIFLAGDSSGGNIAHNVALRAGESG---------IDVLGNILLNPMFGGNERTESEKSLD 234
Query: 210 PSLFLTEEMVDKLLALGVPLGMNKDSPYTSP-SLAAEAVARLHMPPMLLMVAEKDLLHDP 268
F+T D +P G +++ P +P S +++ + P L++VA DL+ D
Sbjct: 235 GKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDW 294
Query: 269 QVEYGEAMARVGKTVE 284
Q+ Y E + + G+ V+
Sbjct: 295 QLAYAEGLKKAGQEVK 310
>AT3G27320.1 | chr3:10090307-10092391 FORWARD LENGTH=461
Length = 460
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 25/211 (11%)
Query: 90 IVSVFLPLAPEHRLPAAIDAGHAALLWLRDVA----C-----------GEDENNNGAAHH 134
+++V LAPE+R PAA + G L WL A C GE + + H
Sbjct: 202 VLAVGYRLAPENRYPAACEDGFKVLKWLGKQANLAECNKSMGNSRRPGGEVKKSEVNKHI 261
Query: 135 LD----PAVE-RLRDEADFARVFLIGDSSGGNXXXXXXXXXXXXXXXXXXXXXPVRLAGG 189
+D VE L + AD +R L+G S G N PV++
Sbjct: 262 VDAFGASLVEPWLANHADPSRCVLLGVSCGANIADYVARKAIEVGQNLD----PVKVVAQ 317
Query: 190 VLLNPGFAREDKSRSELENPPSLFLTEEMVDKLLALGVPLG-MNKDSPYTSPSLAAEAVA 248
VL+ P F ++SE++ S F + M L +P + D +P + +
Sbjct: 318 VLMYPFFIGSVPTQSEIKQANSYFYDKPMCILAWKLFLPEEEFSLDHQAANPLVPGRSPP 377
Query: 249 RLHMPPMLLMVAEKDLLHDPQVEYGEAMARV 279
MPP L +VAE D + D + Y E + +V
Sbjct: 378 LKFMPPTLTIVAEHDWMRDRAIAYSEELRKV 408
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,950,054
Number of extensions: 278242
Number of successful extensions: 654
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 644
Number of HSP's successfully gapped: 11
Length of query: 327
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 228
Effective length of database: 8,392,385
Effective search space: 1913463780
Effective search space used: 1913463780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)