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Os12g0133900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Epa4p.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.01 (0.0236) R2 : 0.778
β1 : 1.16 (0.0863) R2dD : 0.091 R2D : 0.0739
β2 : 2.21 (0.0582) R2dC : 0.704 R2C : 0.689
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0934 (0.0503) R2dN8 : 0.00225 R2N8 : -0.00477
σ : 0.443
deviance : 89.58
__
_____
C
peak time of C : 14.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.83 0.412 9.03 1.15 1.8 -0.812 0.841 0.759 0.0835 15.6 43.37 10 -- --
77.81 0.411 9.03 1.13 1.73 -1.06 0.572 -- 0.0771 15.6 58.83 68 -- --
78.48 0.413 9.02 1.17 1.82 -0.791 -- 0.432 0.0782 15.6 43.74 9 -- --
78.29 0.412 9.03 1.16 1.76 -0.996 -- -- 0.0589 15.4 60.11 68 -- --
94.48 0.453 9.03 1.06 -- -1.91 -- 0.123 0.012 -- 2.866 375 -- --
89.39 0.443 9.01 1.15 2.21 -- 0.235 -- 0.0921 14.8 -- -- -- --
89.58 0.443 9.01 1.16 2.21 -- -- -- 0.0934 14.8 -- -- -- --
94.35 0.452 9.03 1.03 -- -1.9 -- -- 0.0129 -- 2.73 373 -- --
112.65 0.494 9.09 -- 1.64 -0.981 -- -- -0.0952 15.7 42.64 70 -- --
373.01 0.902 9.02 1.06 -- -- -- -- 0.037 -- -- -- -- --
124.92 0.523 9.04 -- 2.19 -- -- -- -0.0355 14.8 -- -- -- --
121.55 0.513 9.05 -- -- -1.93 -- -- -0.0859 -- 0.9654 388 -- --
402.86 0.937 9.05 -- -- -- -- -- -0.081 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.80 atmosphere 1010.0 270 < th dose independent rect. 13 17
2 68.95 wind 5.0 90 < th dose independent rect. 3 5
3 69.04 precipitation 0.1 90 < th dose independent rect. 8 19
4 69.04 precipitation 0.1 90 < th dose dependent rect. 8 19
5 69.14 atmosphere 1010.0 270 < th dose independent rect. 11 10
6 69.14 temperature 10.0 90 > th dose dependent rect. 3 5
9 69.26 wind 9.0 90 < th dose independent rect. 8 19
11 69.27 temperature 10.0 90 > th dose independent rect. 3 5
13 69.27 temperature 30.0 90 < th dose independent rect. 3 5
14 69.27 humidity 50.0 90 > th dose independent rect. 3 5
16 69.27 atmosphere 995.0 90 > th dose independent rect. 3 5
17 69.27 atmosphere 1015.0 90 < th dose independent rect. 3 5
18 69.27 temperature 10.0 90 > th dose independent rect. 8 19
19 69.28 radiation 40.0 90 < th dose independent rect. 3 5
22 69.42 precipitation 0.1 90 < th dose independent rect. 3 5
23 69.42 precipitation 0.1 90 < th dose dependent rect. 3 5
28 69.73 radiation 20.0 270 < th dose dependent rect. 1 7
30 69.74 radiation 40.0 90 < th dose dependent rect. 3 6
32 69.82 temperature 10.0 270 > th dose dependent rect. 1 6
33 69.84 radiation 40.0 90 < th dose dependent rect. 3 8
38 69.93 radiation 20.0 270 < th dose dependent rect. 1 12
40 69.94 temperature 15.0 270 > th dose independent rect. 14 16
42 69.98 wind 5.0 270 < th dose independent rect. 3 2
45 70.09 radiation 20.0 270 < th dose dependent rect. 1 10
46 70.14 temperature 10.0 270 > th dose dependent rect. 3 2
55 70.24 radiation 10.0 270 < th dose independent rect. 1 7
56 70.24 wind 9.0 270 < th dose independent rect. 5 22
65 70.36 temperature 15.0 270 > th dose independent rect. 11 10
66 70.36 radiation 1.0 270 < th dose dependent rect. 3 2
71 70.40 temperature 10.0 270 > th dose independent rect. 3 2
73 70.40 temperature 30.0 270 < th dose independent rect. 3 2
74 70.40 humidity 50.0 270 > th dose independent rect. 3 2
77 70.40 atmosphere 995.0 270 > th dose independent rect. 3 2
78 70.40 atmosphere 1010.0 270 < th dose independent rect. 3 2
80 70.40 radiation 20.0 270 < th dose independent rect. 3 2
83 70.40 temperature 10.0 270 > th dose independent rect. 5 22
84 70.41 radiation 20.0 270 < th dose dependent rect. 3 2
90 70.43 radiation 1.0 270 < th dose independent rect. 3 2
92 70.44 wind 9.0 90 < th dose dependent rect. 3 5
100 70.57 radiation 20.0 90 < th dose independent rect. 3 8
106 70.61 wind 1.0 270 > th dose independent rect. 3 2
107 70.61 radiation 40.0 90 < th dose dependent rect. 3 14
108 70.63 wind 5.0 270 < th dose independent rect. 1 6
109 70.64 wind 9.0 10 < th dose independent rect. 9 18
118 70.71 wind 7.0 10 < th dose independent rect. 3 6
124 70.73 radiation 40.0 90 < th dose dependent rect. 3 12
131 70.76 temperature 10.0 10 > th dose independent rect. 3 6
133 70.76 temperature 30.0 10 < th dose independent rect. 3 6
134 70.76 humidity 50.0 10 > th dose independent rect. 3 6
136 70.76 atmosphere 995.0 10 > th dose independent rect. 3 6
137 70.76 atmosphere 1015.0 10 < th dose independent rect. 3 6
138 70.76 temperature 10.0 10 > th dose independent rect. 9 18
144 70.81 atmosphere 995.0 90 > th dose dependent rect. 8 19
145 70.82 radiation 40.0 10 < th dose independent rect. 3 6
147 70.84 atmosphere 995.0 90 > th dose dependent rect. 19 8
150 70.88 precipitation 0.1 270 < th dose independent rect. 3 2
161 70.88 precipitation 0.1 270 < th dose dependent rect. 3 2
199 71.02 temperature 30.0 90 < th dose dependent rect. 21 6
200 71.02 atmosphere 995.0 270 > th dose dependent rect. 19 6
208 71.07 radiation 40.0 90 < th dose dependent rect. 13 19
218 71.11 humidity 50.0 90 > th dose dependent rect. 3 5
237 71.18 humidity 70.0 270 > th dose independent rect. 1 6
251 71.25 temperature 10.0 270 > th dose independent rect. 1 6
253 71.25 temperature 30.0 270 < th dose independent rect. 1 6
254 71.25 humidity 50.0 270 > th dose independent rect. 1 6
256 71.25 atmosphere 995.0 270 > th dose independent rect. 1 6
257 71.25 atmosphere 1015.0 270 < th dose independent rect. 1 6
262 71.25 radiation 1.0 270 < th dose dependent rect. 3 14
266 71.27 radiation 10.0 270 < th dose dependent sin 5 NA
268 71.28 atmosphere 995.0 90 > th dose independent rect. 8 19
269 71.28 wind 9.0 10 < th dose dependent rect. 3 6
274 71.30 temperature 30.0 90 < th dose dependent rect. 19 8
300 71.41 wind 9.0 270 < th dose dependent rect. 3 2
309 71.47 precipitation 0.1 270 < th dose independent rect. 1 6
311 71.47 precipitation 0.1 270 < th dose dependent rect. 1 6
314 71.49 radiation 1.0 270 > th dose independent sin 3 NA
315 71.49 wind 9.0 270 < th dose independent rect. 20 15
316 71.49 precipitation 0.1 270 < th dose independent rect. 5 22
319 71.49 precipitation 0.1 270 < th dose dependent rect. 5 22
322 71.50 temperature 10.0 270 > th dose independent rect. 20 15
323 71.50 atmosphere 995.0 270 > th dose independent rect. 20 15
337 71.57 humidity 50.0 270 > th dose dependent rect. 3 2
346 71.61 precipitation 0.1 270 < th dose independent rect. 20 15
350 71.61 precipitation 0.1 270 < th dose dependent rect. 20 15
355 71.65 radiation 40.0 270 < th dose independent rect. 13 17
357 71.68 humidity 50.0 270 > th dose independent rect. 20 15
361 71.68 radiation 40.0 90 < th dose dependent rect. 15 17
392 71.77 wind 1.0 270 > th dose independent rect. 11 9
414 71.86 radiation 1.0 270 < th dose independent sin 3 NA
419 71.87 radiation 1.0 270 < th dose independent rect. 2 15
433 71.91 precipitation 0.1 270 < th dose independent rect. 6 8
435 71.91 atmosphere 1015.0 90 < th dose dependent rect. 3 5
440 71.91 precipitation 0.1 270 < th dose dependent rect. 6 8
443 71.92 radiation 10.0 270 < th dose independent rect. 1 12
451 71.94 atmosphere 1015.0 1440 < th dose independent rect. 3 7
453 71.96 wind 9.0 1440 < th dose independent rect. 4 5
454 71.96 temperature 10.0 1440 > th dose independent rect. 4 5
457 71.96 humidity 50.0 1440 > th dose independent rect. 4 5
459 71.96 atmosphere 995.0 1440 > th dose independent rect. 4 5
460 71.96 atmosphere 1015.0 1440 < th dose independent rect. 4 5
463 71.96 temperature 10.0 1440 > th dose independent rect. 9 19
473 71.99 wind 9.0 270 < th dose dependent rect. 1 6
477 72.01 precipitation 0.1 270 < th dose independent rect. 11 9
482 72.01 precipitation 0.1 270 < th dose dependent rect. 11 9
509 72.04 radiation 40.0 10 < th dose dependent rect. 12 21
514 72.06 wind 9.0 270 < th dose independent rect. 11 9
515 72.06 radiation 20.0 90 < th dose independent rect. 3 12
525 72.09 wind 1.0 90 > th dose independent rect. 3 5
530 72.10 temperature 10.0 270 > th dose independent rect. 6 8
531 72.10 atmosphere 995.0 270 > th dose independent rect. 6 8
532 72.10 atmosphere 1015.0 270 < th dose independent rect. 6 8
546 72.13 radiation 40.0 90 < th dose dependent rect. 3 19
550 72.14 radiation 40.0 90 < th dose dependent sin 4 NA
573 72.16 radiation 20.0 90 < th dose independent rect. 3 14
580 72.16 atmosphere 995.0 90 > th dose dependent rect. 22 5
592 72.18 atmosphere 1015.0 270 < th dose dependent rect. 3 2
594 72.18 radiation 40.0 90 < th dose dependent rect. 3 16
611 72.22 atmosphere 995.0 10 > th dose dependent rect. 20 7
613 72.23 wind 9.0 270 < th dose independent rect. 6 8
637 72.28 humidity 70.0 90 > th dose independent rect. 3 8
657 72.30 humidity 50.0 90 > th dose dependent rect. 3 16
658 72.30 radiation 40.0 10 < th dose dependent rect. 3 19
678 72.36 temperature 30.0 10 < th dose dependent rect. 22 5
691 72.40 temperature 15.0 10 > th dose independent rect. 15 17
696 72.42 radiation 40.0 90 < th dose independent rect. 12 10
721 72.46 humidity 50.0 90 > th dose dependent rect. 3 14
723 72.46 temperature 10.0 270 > th dose dependent rect. 13 17
730 72.49 radiation 40.0 90 < th dose independent rect. 3 19
734 72.50 atmosphere 995.0 10 > th dose independent rect. 9 18
738 72.51 wind 9.0 270 < th dose independent rect. 14 16
739 72.51 atmosphere 1015.0 10 < th dose independent rect. 15 17
746 72.52 radiation 20.0 90 < th dose independent rect. 3 10
758 72.54 atmosphere 995.0 270 > th dose dependent rect. 22 2
778 72.57 temperature 30.0 270 < th dose dependent rect. 22 2
799 72.60 atmosphere 995.0 270 > th dose independent rect. 11 9
806 72.62 precipitation 0.1 270 < th dose independent rect. 14 16
809 72.62 precipitation 0.1 270 < th dose dependent rect. 14 16
816 72.63 temperature 30.0 10 < th dose dependent rect. 20 7
831 72.66 wind 1.0 270 > th dose independent rect. 1 6
845 72.68 radiation 1.0 270 > th dose independent rect. 6 7
871 72.74 precipitation 0.1 90 < th dose independent rect. 8 7
875 72.74 precipitation 0.1 90 < th dose dependent rect. 8 7
898 72.75 atmosphere 1015.0 270 < th dose dependent rect. 13 17
912 72.76 humidity 60.0 90 > th dose dependent rect. 3 8
923 72.78 radiation 1.0 90 > th dose independent rect. 8 7
925 72.78 radiation 20.0 90 < th dose independent rect. 3 19
942 72.81 radiation 40.0 90 < th dose independent rect. 3 16
964 72.84 humidity 50.0 270 > th dose independent rect. 14 16
974 72.87 humidity 50.0 270 > th dose independent rect. 6 7
978 72.88 temperature 10.0 90 > th dose independent rect. 8 7
979 72.88 atmosphere 1015.0 90 < th dose independent rect. 8 7
995 72.89 humidity 60.0 90 > th dose dependent rect. 3 12