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Os12g0132800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major facilitator superfamily antiporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.69 (0.0333) R2 : 0.927
β1 : -1.03 (0.122) R2dD : 0.012 R2D : 0.00808
β2 : 7.17 (0.0982) R2dC : 1.15 R2C : 0.767
β3 : 1.95 (0.0854) R2dE : 0.111 R2E : -0.239
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -2.91 (0.292) R2dD*E : 0.0163 R2D*E : 0.00648
γ1 : -0.663 (0.0709) R2dN8 : 0.0188 R2N8 : 0.000365
σ : 0.62
deviance : 177.4
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_____
C
peak time of C : 7.6
E
wheather : radiation
threshold : 0.1698
memory length : 96
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 8.95
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
177.25 0.626 9.68 -1.04 7.18 1.93 0.311 -2.79 -0.66 7.59 0.1571 93 8.91 --
194.73 0.65 9.69 -1.1 6.94 2.07 2.48 -- -0.622 7.67 0.1665 202 9.82 --
177.4 0.62 9.69 -1.03 7.17 1.95 -- -2.91 -0.663 7.6 0.1698 96 8.95 --
211.55 0.677 9.69 -1.07 6.92 2.11 -- -- -0.639 7.67 0.1526 203 9.98 --
612.2 1.15 9.63 -0.947 -- 4.99 -- -3.77 -0.602 -- 1.856 608 1.67 --
246.85 0.737 9.75 -1.27 6.35 -- 2.12 -- -0.753 6.65 -- -- -- --
257.88 0.752 9.75 -1.24 6.36 -- -- -- -0.761 6.61 -- -- -- --
263.52 0.756 9.89 -1.13 -- 7.17 -- -- -0.677 -- 1.034 752 4.71 --
242.6 0.725 9.69 -- 6.89 2.16 -- -- -0.601 7.71 0.12 199 9.99 --
2369.41 2.27 9.88 -1.09 -- -- -- -- -0.632 -- -- -- -- --
298.5 0.808 9.72 -- 6.35 -- -- -- -0.622 6.63 -- -- -- --
279.82 0.779 9.84 -- -- 7.69 -- -- -0.53 -- 0.0001652 797 5.75 --
2400.7 2.29 9.85 -- -- -- -- -- -0.511 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 181.06 atmosphere 995.0 270 > th dose independent rect. 11 7
2 181.37 precipitation 0.1 270 < th dose independent rect. 18 17
3 181.37 precipitation 0.1 270 < th dose dependent rect. 18 17
4 181.40 radiation 1.0 270 < th dose dependent rect. 16 6
5 181.46 wind 1.0 270 > th dose independent rect. 11 7
7 181.66 wind 1.0 270 > th dose independent rect. 17 8
9 181.74 radiation 1.0 270 < th dose independent sin 17 NA
10 181.74 radiation 1.0 270 < th dose independent rect. 16 7
12 181.97 radiation 1.0 90 < th dose dependent sin 15 NA
13 181.97 radiation 1.0 90 < th dose dependent rect. 16 9
14 182.15 radiation 1.0 270 < th dose dependent sin 17 NA
16 182.54 wind 7.0 270 < th dose independent rect. 18 17
24 182.92 atmosphere 995.0 270 > th dose independent rect. 1 16
26 183.23 temperature 10.0 270 > th dose independent rect. 11 7
27 183.23 atmosphere 1015.0 270 < th dose independent rect. 11 7
28 183.23 temperature 10.0 270 > th dose independent rect. 18 17
31 183.49 humidity 50.0 270 > th dose independent rect. 18 17
35 183.59 radiation 10.0 43200 < th dose dependent rect. 20 6
37 183.81 atmosphere 995.0 270 > th dose independent rect. 23 18
40 183.88 humidity 50.0 270 > th dose independent rect. 17 8
41 183.92 precipitation 0.1 270 < th dose independent rect. 17 8
42 183.92 precipitation 0.1 270 < th dose dependent rect. 17 8
46 184.02 humidity 60.0 270 > th dose independent rect. 17 6
48 184.09 wind 9.0 270 < th dose independent rect. 17 8
49 184.13 precipitation 0.1 270 < th dose independent rect. 11 7
50 184.13 precipitation 0.1 270 < th dose dependent rect. 11 7
52 184.20 atmosphere 995.0 270 > th dose independent rect. 18 17
53 184.34 temperature 10.0 270 > th dose independent rect. 17 8
54 184.34 radiation 20.0 270 < th dose independent rect. 17 8
57 184.34 temperature 10.0 270 > th dose independent rect. 1 16
58 184.34 atmosphere 1015.0 270 < th dose independent rect. 1 16
59 184.36 precipitation 0.1 270 < th dose independent rect. 17 6
60 184.36 precipitation 0.1 270 < th dose dependent rect. 17 6
63 184.48 wind 9.0 270 < th dose independent rect. 17 6
74 184.88 radiation 40.0 270 < th dose dependent rect. 17 6
75 184.89 temperature 10.0 270 > th dose independent rect. 17 6
76 184.89 radiation 20.0 270 < th dose independent rect. 17 6
79 184.89 temperature 10.0 270 > th dose independent rect. 23 18
84 184.93 radiation 40.0 270 < th dose dependent rect. 17 8
110 185.31 wind 9.0 270 < th dose independent rect. 11 7
118 185.62 temperature 30.0 270 < th dose independent rect. 17 6
125 185.76 atmosphere 995.0 270 > th dose dependent rect. 11 7
130 185.97 atmosphere 995.0 270 > th dose independent rect. 13 18
132 186.10 radiation 1.0 270 > th dose independent sin 18 NA
135 186.15 wind 9.0 270 < th dose independent rect. 1 16
148 186.47 temperature 30.0 270 < th dose independent rect. 18 17
149 186.51 wind 1.0 270 > th dose independent rect. 17 18
160 186.63 wind 9.0 270 < th dose independent rect. 23 18
161 186.66 precipitation 0.1 270 < th dose independent rect. 1 16
162 186.66 precipitation 0.1 270 < th dose dependent rect. 1 16
164 186.69 precipitation 0.1 270 < th dose independent rect. 23 18
165 186.69 precipitation 0.1 270 < th dose dependent rect. 23 18
171 186.83 radiation 1.0 270 > th dose independent rect. 11 7
179 186.95 atmosphere 995.0 270 > th dose independent rect. 17 6
184 187.12 atmosphere 995.0 270 > th dose dependent rect. 12 5
186 187.16 atmosphere 1000.0 10 > th dose independent rect. 16 16
200 187.36 atmosphere 1000.0 90 > th dose independent rect. 15 18
201 187.41 atmosphere 995.0 270 > th dose independent rect. 17 8
215 187.60 radiation 1.0 270 > th dose independent rect. 18 19
249 187.86 wind 1.0 270 > th dose dependent rect. 11 6
251 187.92 radiation 1.0 270 > th dose independent rect. 5 8
276 188.24 atmosphere 1000.0 10 > th dose independent rect. 16 18
277 188.24 radiation 1.0 270 > th dose independent rect. 17 21
283 188.36 humidity 60.0 270 > th dose independent rect. 18 4
305 188.61 precipitation 0.1 270 < th dose independent rect. 3 10
308 188.61 precipitation 0.1 270 < th dose dependent rect. 3 10
323 188.78 temperature 30.0 270 < th dose independent rect. 18 4
336 188.84 precipitation 0.1 270 < th dose independent rect. 18 4
338 188.84 precipitation 0.1 270 < th dose dependent rect. 18 4
358 189.01 humidity 70.0 10 > th dose independent rect. 19 6
379 189.35 atmosphere 1015.0 270 < th dose independent rect. 17 6
396 189.48 humidity 90.0 270 < th dose independent rect. 13 4
439 189.74 temperature 15.0 270 > th dose independent rect. 7 6
440 189.74 humidity 90.0 270 < th dose independent rect. 11 7
443 189.76 temperature 10.0 270 > th dose dependent rect. 11 7
447 189.79 precipitation 0.1 270 < th dose independent rect. 7 6
451 189.79 precipitation 0.1 270 < th dose dependent rect. 7 6
459 189.83 wind 9.0 270 < th dose independent rect. 7 6
463 189.85 atmosphere 995.0 270 > th dose independent rect. 7 6
464 189.85 atmosphere 1015.0 270 < th dose independent rect. 7 6
466 189.85 temperature 10.0 270 > th dose independent rect. 13 18
476 190.02 atmosphere 1000.0 10 > th dose independent rect. 1 18
482 190.07 wind 1.0 270 > th dose independent rect. 1 16
496 190.25 temperature 10.0 1440 > th dose independent rect. 20 6
499 190.25 temperature 30.0 1440 < th dose independent rect. 20 6
503 190.25 humidity 50.0 1440 > th dose independent rect. 20 6
509 190.25 atmosphere 995.0 1440 > th dose independent rect. 20 6
510 190.25 radiation 1.0 1440 < th dose independent rect. 20 6
530 190.25 temperature 10.0 1440 > th dose independent rect. 2 18
533 190.25 radiation 1.0 1440 < th dose dependent rect. 20 6
564 190.46 wind 7.0 10 < th dose independent rect. 19 6
595 190.64 wind 9.0 270 < th dose independent rect. 13 18
599 190.70 temperature 10.0 10 > th dose independent rect. 19 6
600 190.70 temperature 30.0 10 < th dose independent rect. 19 6
601 190.70 humidity 50.0 10 > th dose independent rect. 19 6
603 190.70 atmosphere 995.0 10 > th dose independent rect. 19 6
604 190.70 radiation 1.0 10 < th dose independent rect. 19 6
609 190.70 humidity 50.0 270 > th dose independent rect. 24 17
610 190.70 temperature 10.0 10 > th dose independent rect. 1 18
612 190.70 atmosphere 1015.0 10 < th dose independent rect. 1 18
613 190.70 radiation 1.0 10 < th dose dependent rect. 19 6
619 190.73 precipitation 0.1 10 < th dose independent rect. 19 6
620 190.73 precipitation 0.1 10 < th dose dependent rect. 19 6
622 190.76 wind 1.0 10 > th dose independent rect. 19 6
643 190.80 radiation 1.0 270 > th dose independent rect. 13 4
660 191.04 radiation 1.0 90 > th dose independent rect. 9 6
698 191.30 radiation 40.0 10 < th dose dependent rect. 14 20
730 191.57 atmosphere 1015.0 270 < th dose independent rect. 18 4
736 191.65 wind 1.0 10 > th dose independent rect. 19 10
771 191.92 humidity 50.0 270 > th dose independent rect. 11 6
832 192.24 temperature 10.0 90 > th dose independent rect. 9 6
833 192.24 atmosphere 1015.0 90 < th dose independent rect. 9 6
838 192.25 precipitation 0.1 90 < th dose independent rect. 9 6
839 192.25 precipitation 0.1 90 < th dose dependent rect. 9 6
844 192.29 wind 9.0 90 < th dose independent rect. 9 6
851 192.34 wind 9.0 270 < th dose independent rect. 8 14
858 192.37 atmosphere 1000.0 10 > th dose independent rect. 14 20
873 192.44 atmosphere 995.0 270 > th dose independent rect. 13 14
880 192.45 radiation 40.0 90 < th dose independent rect. 15 18
887 192.48 wind 9.0 270 < th dose dependent rect. 17 6
904 192.56 temperature 10.0 270 > th dose independent rect. 3 10
905 192.56 atmosphere 995.0 270 > th dose independent rect. 3 10
906 192.56 atmosphere 1015.0 270 < th dose independent rect. 3 10
907 192.56 temperature 10.0 270 > th dose independent rect. 13 14
926 192.73 atmosphere 995.0 90 > th dose dependent rect. 15 18
927 192.74 atmosphere 1015.0 270 < th dose dependent rect. 18 5
934 192.79 wind 1.0 270 > th dose independent rect. 7 6
936 192.79 wind 9.0 270 < th dose independent rect. 3 10
978 192.96 wind 9.0 270 < th dose dependent rect. 18 4
993 193.07 atmosphere 995.0 10 > th dose dependent rect. 16 16
997 193.09 atmosphere 1015.0 270 < th dose independent rect. 18 17