Os12g0126500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0126500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.94 | 0.428 | 8.19 | -0.64 | 0.4 | 0.847 | 0.364 | 0.0801 | -0.105 | 22.6 | 20.7 | 729 | -- | -- |
| 82.96 | 0.424 | 8.19 | -0.657 | 0.4 | 0.84 | 0.388 | -- | -0.109 | 22.6 | 20.76 | 731 | -- | -- |
| 83.42 | 0.425 | 8.19 | -0.625 | 0.399 | 0.854 | -- | 0.211 | -0.1 | 22.6 | 20.72 | 731 | -- | -- |
| 83.58 | 0.426 | 8.19 | -0.67 | 0.398 | 0.839 | -- | -- | -0.108 | 22.6 | 20.77 | 728 | -- | -- |
| 92.04 | 0.447 | 8.19 | -0.626 | -- | 0.947 | -- | 0.337 | -0.131 | -- | 21.21 | 849 | -- | -- |
| 104.3 | 0.479 | 8.15 | -0.345 | 0.533 | -- | 0.357 | -- | 0.0903 | 22.3 | -- | -- | -- | -- |
| 104.81 | 0.479 | 8.15 | -0.36 | 0.531 | -- | -- | -- | 0.0893 | 22.4 | -- | -- | -- | -- |
| 92.23 | 0.447 | 8.19 | -0.693 | -- | 0.916 | -- | -- | -0.137 | -- | 21.2 | 829 | -- | -- |
| 93.66 | 0.451 | 8.17 | -- | 0.413 | 0.622 | -- | -- | -0.00969 | 22.5 | 21.2 | 734 | -- | -- |
| 122.01 | 0.516 | 8.14 | -0.351 | -- | -- | -- | -- | 0.0909 | -- | -- | -- | -- | -- |
| 108.22 | 0.487 | 8.14 | -- | 0.529 | -- | -- | -- | 0.129 | 22.3 | -- | -- | -- | -- |
| 103.69 | 0.474 | 8.17 | -- | -- | 0.744 | -- | -- | -0.0393 | -- | 21.21 | 777 | -- | -- |
| 125.26 | 0.522 | 8.13 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.98 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 2 | 81.32 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 3 | 81.73 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 4 | 81.88 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 20 |
| 5 | 81.95 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 8 | 82.13 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 19 | 82.38 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 23 | 82.50 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 21 |
| 25 | 82.57 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 35 | 82.69 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 16 |
| 47 | 82.76 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 53 | 82.84 | temperature | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 86 | 83.12 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 140 | 83.43 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 165 | 83.60 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 181 | 83.73 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 198 | 83.81 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 23 |
| 202 | 83.82 | wind | 5 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 238 | 83.96 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 240 | 83.96 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 261 | 84.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 267 | 84.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 271 | 84.10 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 279 | 84.13 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |
| 280 | 84.13 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 23 |
| 283 | 84.14 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 295 | 84.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 315 | 84.25 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 23 |
| 320 | 84.27 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 365 | 84.46 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 370 | 84.46 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 420 | 84.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 487 | 84.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 496 | 84.88 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 527 | 84.95 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 533 | 84.97 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 604 | 85.16 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 619 | 85.20 | temperature | 20 | 30 | > th | dose independent | rect. | 12 | 23 |
| 697 | 85.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 698 | 85.41 | wind | 5 | 4320 | > th | dose independent | rect. | 17 | 10 |
| 764 | 85.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 774 | 85.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 788 | 85.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 862 | 85.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 863 | 85.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 870 | 85.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 958 | 85.92 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 7 |
| 964 | 85.93 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 985 | 85.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 6 |