Os12g0121300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphoethanolamine cytidylyltransferase.
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Os12g0121300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphoethanolamine cytidylyltransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.99 | 0.301 | 11.1 | -0.548 | 0.696 | -0.179 | -1.83 | 5.15 | -0.482 | 12.1 | 28.99 | 661 | -- | -- |
| 44.5 | 0.311 | 11.1 | -0.785 | 0.671 | -0.183 | -1.91 | -- | -0.454 | 12.3 | 28.87 | 47520 | -- | -- |
| 54.8 | 0.345 | 11.1 | -0.443 | 0.717 | -0.17 | -- | 5.06 | -0.439 | 12.4 | 27.75 | 784 | -- | -- |
| 59.82 | 0.363 | 11.1 | -0.999 | 0.759 | -0.219 | -- | -- | -0.532 | 12.9 | 25.38 | 45029 | -- | -- |
| 83.09 | 0.425 | 11.1 | -0.265 | -- | -0.528 | -- | 3.14 | -0.288 | -- | 23 | 977 | -- | -- |
| 45.3 | 0.316 | 11.1 | -0.96 | 0.679 | -- | -1.89 | -- | -0.538 | 12.3 | -- | -- | -- | -- |
| 60.54 | 0.364 | 11.2 | -1.03 | 0.689 | -- | -- | -- | -0.546 | 12.7 | -- | -- | -- | -- |
| 84.43 | 0.43 | 11.2 | -1.17 | -- | 0.636 | -- | -- | -0.642 | -- | 10.54 | 3786 | -- | -- |
| 62.28 | 0.368 | 11.1 | -- | 0.673 | -0.826 | -- | -- | -0.184 | 12.7 | 7.213 | 47520 | -- | -- |
| 90.28 | 0.444 | 11.2 | -1.06 | -- | -- | -- | -- | -0.558 | -- | -- | -- | -- | -- |
| 88.59 | 0.44 | 11.1 | -- | 0.705 | -- | -- | -- | -0.431 | 12.7 | -- | -- | -- | -- |
| 90.58 | 0.443 | 11.1 | -- | -- | -0.868 | -- | -- | -0.181 | -- | -3.163 | 47520 | -- | -- |
| 119.7 | 0.511 | 11.1 | -- | -- | -- | -- | -- | -0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.10 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 2 | 38.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 4 | 38.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 5 | 38.41 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 7 | 38.42 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 7 |
| 10 | 38.44 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 15 | 38.52 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 17 | 38.60 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 27 | 38.75 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 28 | 38.75 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 31 | 38.80 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 36 | 38.85 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 6 |
| 38 | 38.86 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 39 | 38.86 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 40 | 38.87 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 43 | 38.89 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 44 | 38.89 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 49 | 38.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 51 | 38.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 60 | 38.95 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 65 | 38.97 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 70 | 38.98 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 72 | 38.98 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 78 | 39.01 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 7 | 6 |
| 93 | 39.03 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 116 | 39.05 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 14 | 22 |
| 117 | 39.06 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 131 | 39.08 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 151 | 39.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 176 | 39.11 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 190 | 39.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 199 | 39.12 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 235 | 39.13 | radiation | 20.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 283 | 39.16 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 303 | 39.17 | wind | 9.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 347 | 39.18 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 354 | 39.19 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 368 | 39.19 | wind | 7.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 393 | 39.20 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 402 | 39.20 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 6 |
| 431 | 39.21 | radiation | 20.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 569 | 39.23 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 605 | 39.24 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 619 | 39.24 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 629 | 39.24 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 657 | 39.25 | wind | 9.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 777 | 39.26 | radiation | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 850 | 39.28 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 11 |