Os12g0112800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0112800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.37 | 0.32 | 11.6 | 1.34 | 1.2 | -1.23 | -0.199 | 0.772 | 0.33 | 1.46 | 20.61 | 1559 | -- | -- |
| 46.83 | 0.319 | 11.7 | 1.13 | 1.18 | -1.23 | -0.23 | -- | 0.262 | 1.12 | 21.04 | 1799 | -- | -- |
| 46.32 | 0.317 | 11.6 | 1.4 | 1.18 | -1.24 | -- | 1.01 | 0.344 | 1.34 | 21.4 | 1648 | -- | -- |
| 47.02 | 0.319 | 11.7 | 1.11 | 1.19 | -1.19 | -- | -- | 0.268 | 1.31 | 21.08 | 1680 | -- | -- |
| 73.26 | 0.401 | 11.6 | 1.36 | -- | -2.12 | -- | 1.49 | 0.403 | -- | 21.4 | 1648 | -- | -- |
| 91.4 | 0.448 | 11.7 | 0.67 | 1.17 | -- | -0.237 | -- | -0.0158 | 1.5 | -- | -- | -- | -- |
| 91.63 | 0.448 | 11.7 | 0.678 | 1.17 | -- | -- | -- | -0.0145 | 1.51 | -- | -- | -- | -- |
| 73.72 | 0.402 | 11.6 | 1.12 | -- | -2.07 | -- | -- | 0.341 | -- | 20.77 | 1720 | -- | -- |
| 75.59 | 0.405 | 11.7 | -- | 1.23 | -0.839 | -- | -- | 0.0725 | 1.48 | 21.9 | 1520 | -- | -- |
| 176.02 | 0.62 | 11.7 | 0.724 | -- | -- | -- | -- | 0.0108 | -- | -- | -- | -- | -- |
| 103.73 | 0.476 | 11.7 | -- | 1.19 | -- | -- | -- | -0.09 | 1.52 | -- | -- | -- | -- |
| 105.38 | 0.48 | 11.7 | -- | -- | -1.86 | -- | -- | 0.189 | -- | 20.48 | 12 | -- | -- |
| 189.87 | 0.643 | 11.7 | -- | -- | -- | -- | -- | -0.0696 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 4 | 46.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 5 | 46.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 11 | 46.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 17 | 46.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 21 | 46.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 30 | 46.42 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 33 | 46.42 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 47 | 46.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 71 | 46.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 109 | 46.85 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 132 | 46.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 133 | 46.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 296 | 47.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 379 | 47.98 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 432 | 48.29 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 435 | 48.29 | temperature | 20 | 1440 | > th | dose dependent | sin | 3 | NA |
| 528 | 48.61 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 529 | 48.61 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 588 | 48.75 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 595 | 48.77 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 599 | 48.78 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 891 | 49.14 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 988 | 49.24 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |