Os12g0111000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0111000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.7 | 0.575 | 6.35 | 0.458 | 1.28 | 2.24 | -0.0017 | 7.03 | 0.23 | 5.43 | 17.17 | 5782 | -- | -- |
| 165.15 | 0.599 | 6.49 | -0.837 | 1.34 | 2.14 | 0.386 | -- | 0.436 | 5.43 | 28.2 | 3423 | -- | -- |
| 149.7 | 0.57 | 6.35 | 0.46 | 1.28 | 2.24 | -- | 7.04 | 0.231 | 5.43 | 17.16 | 5779 | -- | -- |
| 163.37 | 0.595 | 6.52 | -0.89 | 1.33 | 2.1 | -- | -- | 0.319 | 5.78 | 27.55 | 3502 | -- | -- |
| 233 | 0.711 | 6.37 | 0.534 | -- | 2.29 | -- | 7.18 | 0.267 | -- | 17.49 | 5642 | -- | -- |
| 296.2 | 0.807 | 6.54 | -0.332 | 1.37 | -- | 0.171 | -- | 0.217 | 5.23 | -- | -- | -- | -- |
| 296.27 | 0.806 | 6.54 | -0.332 | 1.37 | -- | -- | -- | 0.216 | 5.22 | -- | -- | -- | -- |
| 243.48 | 0.727 | 6.61 | -0.966 | -- | 1.89 | -- | -- | 0.0454 | -- | 24.62 | 2751 | -- | -- |
| 182.02 | 0.628 | 6.48 | -- | 1.32 | 1.9 | -- | -- | 0.469 | 5.69 | 28.36 | 3476 | -- | -- |
| 393.98 | 0.927 | 6.56 | -0.284 | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
| 299.17 | 0.809 | 6.54 | -- | 1.36 | -- | -- | -- | 0.253 | 5.23 | -- | -- | -- | -- |
| 263.53 | 0.756 | 6.48 | -- | -- | 1.73 | -- | -- | 0.589 | -- | 29.2 | 2709 | -- | -- |
| 396.11 | 0.929 | 6.55 | -- | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.50 | temperature | 25 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 2 | 150.64 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 3 | 150.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 4 | 150.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 10 | 151.95 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 11 | 151.96 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 12 | 152.11 | temperature | 25 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 17 | 152.53 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 31 | 153.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 20 |
| 35 | 153.35 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 62 | 153.61 | temperature | 20 | 4320 | > th | dose dependent | sin | 7 | NA |
| 120 | 154.14 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 123 | 154.15 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 10 |
| 127 | 154.20 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 130 | 154.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 219 | 154.93 | temperature | 20 | 4320 | > th | dose dependent | sin | 16 | NA |
| 247 | 155.17 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 283 | 155.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 289 | 155.41 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 9 |
| 429 | 155.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 496 | 155.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 580 | 156.28 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 646 | 156.50 | temperature | 30 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 652 | 156.52 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 654 | 156.52 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 674 | 156.60 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 683 | 156.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 692 | 156.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 12 |
| 700 | 156.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 733 | 156.78 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 734 | 156.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 741 | 156.79 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 825 | 157.04 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 895 | 157.23 | temperature | 30 | 14400 | > th | dose dependent | sin | 10 | NA |
| 905 | 157.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 18 |
| 911 | 157.28 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 942 | 157.37 | temperature | 30 | 14400 | < th | dose independent | sin | 10 | NA |
| 976 | 157.47 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 977 | 157.47 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |