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Os12g0106100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.53 (0.0247) R2 : 0.735
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.26 (0.0635) R2dC : 0.739 R2C : 0.734
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0439 (0.052) R2dN8 : 0.000536 R2N8 : -0.00384
σ : 0.466
deviance : 99.27
__
_____
C
peak time of C : 7.71
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.58 0.419 8.53 0.633 2.43 -0.681 0.564 -0.553 0.0861 6.69 9.99 269 -- --
80.87 0.419 8.52 0.643 2.4 -0.648 0.513 -- 0.0937 6.73 10 263 -- --
80.35 0.417 8.54 0.623 2.42 -0.688 -- -0.488 0.0834 6.67 9.992 260 -- --
81.48 0.42 8.53 0.652 2.39 -0.649 -- -- 0.0954 6.72 9.99 258 -- --
315.07 0.831 8.56 0.722 -- -0.681 -- -0.0622 0.2 -- 9.992 260 -- --
87.86 0.439 8.52 0.61 2.25 -- 0.623 -- 0.115 7.75 -- -- -- --
88.96 0.442 8.52 0.625 2.25 -- -- -- 0.114 7.73 -- -- -- --
315.09 0.83 8.56 0.727 -- -0.682 -- -- 0.201 -- 9.992 260 -- --
88.32 0.438 8.54 -- 2.46 -0.73 -- -- 0.00545 6.66 10.77 258 -- --
362.75 0.89 8.57 0.654 -- -- -- -- 0.146 -- -- -- -- --
99.27 0.466 8.53 -- 2.26 -- -- -- 0.0439 7.71 -- -- -- --
329 0.848 8.58 -- -- -0.662 -- -- 0.119 -- 9.992 260 -- --
374.04 0.903 8.59 -- -- -- -- -- 0.0734 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.78 radiation 10 270 < th dose independent rect. 5 12
2 75.92 radiation 20 270 < th dose dependent rect. 5 12
12 77.16 radiation 20 270 < th dose independent rect. 11 21
16 77.40 radiation 30 270 < th dose dependent rect. 12 21
18 77.46 radiation 10 270 < th dose independent rect. 3 22
31 77.78 radiation 10 270 > th dose independent rect. 8 10
50 77.90 radiation 20 270 < th dose dependent rect. 3 22
51 77.91 radiation 10 720 > th dose independent rect. 9 3
94 78.43 radiation 20 90 < th dose dependent rect. 5 22
100 78.52 radiation 20 90 < th dose dependent rect. 6 19
111 78.63 radiation 10 270 < th dose independent rect. 19 23
117 78.69 radiation 20 10 < th dose dependent rect. 6 21
119 78.70 temperature 20 270 > th dose independent rect. 8 20
122 78.73 radiation 10 270 < th dose independent rect. 11 6
137 78.87 radiation 20 270 < th dose dependent rect. 19 23
140 78.88 humidity 80 14400 > th dose dependent rect. 5 1
146 78.94 radiation 10 270 > th dose independent sin 23 NA
152 79.02 radiation 10 90 < th dose independent rect. 6 19
158 79.09 humidity 50 14400 > th dose dependent rect. 5 1
179 79.13 radiation 20 43200 < th dose independent rect. 3 3
187 79.18 radiation 20 10 < th dose independent rect. 6 10
204 79.22 radiation 20 10 < th dose dependent rect. 6 10
227 79.36 radiation 10 270 < th dose independent sin 0 NA
229 79.37 humidity 50 10 > th dose dependent rect. 6 14
238 79.40 humidity 50 90 > th dose dependent rect. 6 13
241 79.42 radiation 30 30 < th dose independent rect. 6 5
245 79.44 radiation 20 270 < th dose dependent rect. 11 6
248 79.46 humidity 70 10 > th dose independent rect. 6 14
254 79.49 humidity 70 90 > th dose dependent rect. 6 13
267 79.54 humidity 70 10 > th dose independent rect. 6 21
277 79.58 radiation 20 270 < th dose dependent sin 0 NA
280 79.59 radiation 10 270 < th dose independent no NA NA
289 79.66 radiation 20 10 < th dose independent rect. 6 21
295 79.67 radiation 10 270 > th dose independent rect. 16 23
322 79.79 radiation 20 720 > th dose independent rect. 11 1
329 79.83 radiation 10 4320 < th dose dependent rect. 3 2
330 79.83 radiation 40 43200 < th dose dependent rect. 1 4
341 79.88 humidity 70 10 > th dose independent rect. 6 4
348 79.90 temperature 10 90 > th dose dependent rect. 9 21
352 79.91 radiation 20 270 < th dose dependent no NA NA
355 79.94 radiation 10 270 > th dose independent no NA NA
436 79.95 radiation 40 10 < th dose dependent rect. 6 5
472 80.04 radiation 40 43200 > th dose dependent rect. 15 17
489 80.06 radiation 40 43200 < th dose dependent rect. 21 8
491 80.07 radiation 30 270 < th dose independent rect. 12 12
495 80.07 radiation 30 90 < th dose dependent rect. 6 4
497 80.08 humidity 70 10 > th dose dependent rect. 6 12
501 80.09 humidity 70 30 > th dose independent rect. 13 21
511 80.12 radiation 10 90 > th dose independent rect. 11 7
526 80.13 wind 5 270 < th dose independent rect. 17 11
529 80.14 humidity 90 14400 < th dose independent rect. 5 2
543 80.18 radiation 1 14400 < th dose independent rect. 3 2
568 80.24 temperature 20 14400 < th dose independent rect. 22 1
569 80.24 humidity 70 270 > th dose independent rect. 4 13
586 80.28 temperature 20 14400 < th dose independent rect. 18 1
589 80.29 temperature 10 43200 > th dose independent rect. 10 8
609 80.33 temperature 20 14400 < th dose independent rect. 6 18
611 80.33 radiation 40 43200 > th dose dependent rect. 15 1
629 80.34 temperature 20 14400 < th dose independent rect. 6 21
643 80.36 temperature 20 14400 > th dose independent rect. 6 18
673 80.40 radiation 1 43200 < th dose independent rect. 10 2
678 80.40 radiation 1 43200 < th dose dependent rect. 10 2
684 80.41 wind 7 720 < th dose independent rect. 16 5
685 80.41 temperature 20 14400 < th dose independent rect. 9 18
687 80.41 radiation 20 720 < th dose independent rect. 21 19
707 80.43 radiation 1 43200 > th dose independent rect. 10 2
708 80.43 temperature 10 43200 > th dose independent rect. 8 4
717 80.43 radiation 10 270 < th dose independent rect. 16 23
720 80.43 humidity 50 270 > th dose dependent rect. 4 13
725 80.44 temperature 20 14400 < th dose dependent rect. 23 1
747 80.46 temperature 20 14400 < th dose independent rect. 11 13
774 80.48 temperature 20 14400 < th dose independent sin 18 NA
778 80.48 radiation 10 43200 < th dose independent rect. 17 13
792 80.48 radiation 1 43200 < th dose dependent rect. 8 5
797 80.48 temperature 10 10 > th dose dependent rect. 9 21
803 80.49 temperature 10 43200 > th dose independent rect. 10 6
806 80.49 temperature 20 14400 > th dose independent rect. 9 18
814 80.49 wind 9 270 < th dose dependent rect. 17 11
822 80.50 radiation 40 43200 < th dose dependent rect. 19 10
847 80.52 humidity 90 14400 > th dose independent rect. 5 2
855 80.52 wind 7 270 < th dose independent rect. 7 22
860 80.53 temperature 20 14400 < th dose independent no NA NA
861 80.53 temperature 20 14400 > th dose independent rect. 22 1
865 80.53 temperature 20 14400 > th dose independent rect. 9 15
871 80.53 temperature 20 14400 < th dose independent rect. 21 23
887 80.54 temperature 20 14400 < th dose independent rect. 12 23
901 80.55 radiation 20 43200 < th dose independent rect. 21 9
919 80.55 temperature 20 14400 < th dose independent rect. 18 23
962 80.58 temperature 20 14400 > th dose independent sin 18 NA
978 80.59 temperature 20 14400 > th dose independent rect. 6 3
979 80.59 temperature 20 14400 < th dose independent rect. 6 3
980 80.59 radiation 1 43200 < th dose independent rect. 8 4
998 80.60 temperature 20 14400 > th dose independent no NA NA