Os12g0106000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ferritin 1, chloroplast precursor (EC 1.16.3.1) (ZmFer1).
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Os12g0106000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ferritin 1, chloroplast precursor (EC 1.16.3.1) (ZmFer1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.1 | 0.71 | 15.1 | -1.2 | 2.17 | -0.86 | 0.583 | -4.02 | -0.465 | 10.7 | 1.08 | 4304 | -- | -- |
| 230.46 | 0.707 | 15 | -0.365 | 2.06 | -0.797 | 0.771 | -- | -0.0941 | 10.7 | 11.36 | 12729 | -- | -- |
| 228.83 | 0.705 | 15.1 | -1.18 | 2.17 | -0.853 | -- | -4.2 | -0.466 | 10.7 | 1.077 | 4270 | -- | -- |
| 230.76 | 0.708 | 15 | -0.342 | 2.17 | -0.768 | -- | -- | -0.0879 | 10.7 | 10.02 | 12875 | -- | -- |
| 295.97 | 0.806 | 15.1 | -0.453 | -- | 1.52 | -- | 0.273 | -0.456 | -- | 1.077 | 4270 | -- | -- |
| 253.94 | 0.747 | 15 | -0.419 | 2.21 | -- | 0.705 | -- | -0.414 | 10.8 | -- | -- | -- | -- |
| 256.01 | 0.749 | 15 | -0.391 | 2.21 | -- | -- | -- | -0.412 | 10.7 | -- | -- | -- | -- |
| 296.45 | 0.805 | 15.1 | -0.456 | -- | 1.52 | -- | -- | -0.457 | -- | 1.077 | 4270 | -- | -- |
| 230.42 | 0.707 | 14.9 | -- | 2.16 | -0.777 | -- | -- | -0.0915 | 10.7 | 10.01 | 12875 | -- | -- |
| 556.65 | 1.1 | 15.1 | -0.435 | -- | -- | -- | -- | -0.425 | -- | -- | -- | -- | -- |
| 260.04 | 0.754 | 15 | -- | 2.21 | -- | -- | -- | -0.368 | 10.8 | -- | -- | -- | -- |
| 301.93 | 0.812 | 15.1 | -- | -- | 1.52 | -- | -- | -0.406 | -- | 1.077 | 4270 | -- | -- |
| 561.64 | 1.11 | 15.1 | -- | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 3 | 214.07 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 7 | 214.30 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 15 | 214.92 | humidity | 80.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 16 | 214.94 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 19 | 215.22 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 31 | 215.54 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 36 | 215.77 | humidity | 80.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 57 | 216.60 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 60 | 216.68 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 71 | 217.02 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 108 | 217.93 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 111 | 218.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 147 | 218.32 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 194 | 218.78 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 222 | 218.99 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 256 | 219.33 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 266 | 219.43 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 14 |
| 280 | 219.55 | wind | 3.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 285 | 219.59 | wind | 3.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 321 | 219.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 325 | 219.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 329 | 219.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 330 | 219.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 340 | 219.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 11 |
| 376 | 220.17 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 424 | 220.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 429 | 220.40 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 445 | 220.44 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 6 | NA |
| 465 | 220.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 466 | 220.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 469 | 220.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 474 | 220.49 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 506 | 220.59 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 10 | 13 |
| 529 | 220.66 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 6 | NA |
| 531 | 220.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 534 | 220.67 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 6 | NA |
| 535 | 220.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 12 | 9 |
| 536 | 220.67 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 6 | NA |
| 555 | 220.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 586 | 220.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 589 | 220.79 | wind | 3.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 604 | 220.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 605 | 220.84 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 607 | 220.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 611 | 220.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 612 | 220.86 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 632 | 220.90 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 652 | 220.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 750 | 221.12 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 753 | 221.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 790 | 221.21 | temperature | 25.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 805 | 221.23 | temperature | 25.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 814 | 221.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 5 |
| 844 | 221.30 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 894 | 221.40 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 895 | 221.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 897 | 221.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 901 | 221.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 903 | 221.41 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 940 | 221.47 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 952 | 221.49 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 958 | 221.50 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |