FiT-DB / Search/ Help/ Sample detail

Os11g0707900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF740 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.4 (0.0261) R2 : 0.564
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.38 (0.0624) R2dC : 0.468 R2C : 0.434
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.564 (0.0549) R2dN8 : 0.13 R2N8 : 0.0961
σ : 0.493
deviance : 110.86
__
_____
C
peak time of C : 23.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
97.63 0.464 6.41 -0.0647 1.4 0.584 -0.744 0.113 -0.599 23.3 69.96 1562 -- --
97.64 0.46 6.41 -0.0774 1.4 0.598 -0.74 -- -0.601 23.3 70 1572 -- --
99.91 0.466 6.4 -0.0155 1.4 0.578 -- 0.229 -0.593 23.3 69.95 1591 -- --
99.86 0.465 6.4 -0.05 1.39 0.573 -- -- -0.566 23.3 68 1593 -- --
162.73 0.594 6.4 -0.329 -- 1.33 -- -0.308 -0.657 -- 73.04 946 -- --
108.82 0.489 6.4 0.0366 1.37 -- -0.676 -- -0.559 23.2 -- -- -- --
110.76 0.493 6.4 0.0635 1.38 -- -- -- -0.557 23.2 -- -- -- --
161.54 0.592 6.39 -0.0929 -- 1.38 -- -- -0.653 -- 73.38 947 -- --
99.88 0.465 6.4 -- 1.39 0.579 -- -- -0.557 23.3 68.54 1619 -- --
229.12 0.707 6.36 0.0971 -- -- -- -- -0.545 -- -- -- -- --
110.86 0.493 6.4 -- 1.38 -- -- -- -0.564 23.2 -- -- -- --
161.65 0.592 6.39 -- -- 1.42 -- -- -0.65 -- 74 940 -- --
229.37 0.707 6.37 -- -- -- -- -- -0.556 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 94.83 radiation 10.0 4320 < th dose dependent rect. 9 1
2 95.55 humidity 70.0 1440 < th dose independent rect. 11 1
3 95.55 humidity 70.0 1440 < th dose independent rect. 10 3
5 96.30 humidity 70.0 1440 > th dose independent rect. 10 3
8 96.70 wind 3.0 14400 > th dose independent rect. 13 1
12 96.96 wind 3.0 14400 < th dose independent rect. 13 1
13 96.98 wind 7.0 4320 < th dose independent rect. 24 12
14 96.98 wind 7.0 4320 > th dose dependent rect. 21 15
15 97.00 wind 7.0 4320 < th dose independent rect. 22 14
18 97.03 humidity 70.0 1440 < th dose independent rect. 17 20
19 97.07 wind 1.0 43200 > th dose independent rect. 2 3
20 97.10 wind 7.0 4320 > th dose independent rect. 21 15
25 97.22 wind 7.0 4320 < th dose independent rect. 4 8
27 97.24 wind 7.0 4320 > th dose independent rect. 24 12
32 97.30 wind 1.0 43200 < th dose independent rect. 2 3
34 97.30 wind 7.0 4320 > th dose dependent rect. 4 8
35 97.31 wind 7.0 4320 > th dose independent rect. 4 8
36 97.32 humidity 70.0 1440 > th dose independent rect. 17 20
40 97.35 radiation 10.0 4320 < th dose independent rect. 9 2
44 97.36 wind 7.0 4320 > th dose dependent rect. 24 12
57 97.49 humidity 80.0 43200 > th dose dependent rect. 11 4
65 97.57 radiation 10.0 4320 > th dose independent rect. 9 2
66 97.57 humidity 80.0 43200 > th dose dependent rect. 12 2
110 97.82 humidity 90.0 14400 > th dose dependent rect. 24 1
136 97.92 humidity 70.0 1440 < th dose independent rect. 10 10
147 97.92 humidity 90.0 43200 > th dose dependent rect. 10 8
152 97.94 humidity 90.0 14400 > th dose dependent rect. 23 3
211 98.09 temperature 25.0 4320 < th dose independent rect. 7 8
232 98.13 temperature 25.0 4320 < th dose independent rect. 5 10
257 98.21 temperature 25.0 4320 > th dose independent rect. 7 8
266 98.23 temperature 25.0 4320 > th dose independent rect. 5 10
288 98.24 humidity 70.0 1440 > th dose independent rect. 2 11
295 98.25 precipitation 0.1 43200 > th dose independent rect. 9 2
300 98.25 humidity 70.0 1440 > th dose independent rect. 22 15
302 98.25 precipitation 0.1 43200 > th dose dependent rect. 9 2
303 98.26 humidity 70.0 1440 < th dose independent sin 0 NA
321 98.27 humidity 70.0 1440 < th dose independent no NA NA
379 98.27 humidity 90.0 43200 > th dose dependent rect. 15 1
387 98.29 wind 1.0 43200 > th dose independent rect. 5 1
390 98.29 temperature 25.0 4320 > th dose independent rect. 5 13
393 98.30 precipitation 0.1 43200 < th dose independent rect. 9 1
394 98.30 temperature 25.0 4320 > th dose independent rect. 8 6
398 98.30 precipitation 0.1 43200 < th dose dependent rect. 9 1
399 98.30 humidity 90.0 14400 > th dose dependent rect. 22 5
401 98.31 humidity 90.0 43200 > th dose independent rect. 9 8
414 98.33 precipitation 0.1 43200 > th dose independent rect. 9 5
415 98.33 precipitation 0.1 43200 < th dose independent rect. 9 7
420 98.33 precipitation 0.1 43200 < th dose dependent rect. 9 7
423 98.34 precipitation 0.1 43200 < th dose independent rect. 9 5
427 98.34 precipitation 0.1 43200 < th dose dependent rect. 9 5
430 98.35 precipitation 0.1 43200 > th dose independent rect. 8 8
450 98.40 radiation 1.0 14400 > th dose independent rect. 18 1
473 98.42 humidity 80.0 43200 > th dose independent rect. 12 1
480 98.43 humidity 70.0 1440 > th dose independent rect. 9 14
487 98.44 humidity 70.0 1440 > th dose independent rect. 9 11
497 98.44 humidity 70.0 1440 > th dose independent rect. 9 18
540 98.49 radiation 10.0 1440 < th dose independent rect. 14 21
541 98.49 wind 9.0 4320 > th dose dependent rect. 17 1
545 98.50 temperature 25.0 4320 > th dose independent sin 1 NA
546 98.50 temperature 25.0 4320 < th dose independent sin 1 NA
551 98.50 wind 3.0 43200 > th dose dependent rect. 22 8
552 98.50 humidity 90.0 14400 > th dose dependent rect. 20 9
555 98.51 wind 1.0 43200 < th dose dependent rect. 2 4
556 98.51 wind 9.0 4320 > th dose dependent rect. 17 6
576 98.54 humidity 90.0 14400 > th dose independent rect. 21 7
622 98.57 humidity 90.0 43200 < th dose independent rect. 9 6
673 98.63 wind 1.0 43200 < th dose independent rect. 5 1
681 98.63 precipitation 0.1 43200 > th dose dependent rect. 8 8
706 98.66 temperature 25.0 43200 < th dose independent rect. 11 1
707 98.66 humidity 90.0 43200 < th dose independent rect. 10 4
714 98.67 temperature 25.0 43200 > th dose independent rect. 11 1
731 98.68 humidity 60.0 1440 > th dose dependent rect. 5 12
732 98.68 humidity 60.0 1440 > th dose dependent rect. 3 14
740 98.70 wind 9.0 4320 < th dose independent rect. 17 5
742 98.70 temperature 25.0 4320 > th dose dependent rect. 13 3
766 98.71 wind 9.0 4320 > th dose dependent rect. 16 10
833 98.75 humidity 70.0 1440 > th dose independent rect. 2 19
853 98.76 humidity 70.0 720 > th dose independent sin 10 NA
854 98.76 humidity 70.0 1440 > th dose independent no NA NA
855 98.76 humidity 90.0 43200 > th dose independent rect. 16 1
885 98.76 humidity 70.0 1440 > th dose independent rect. 22 22
895 98.76 temperature 25.0 4320 > th dose dependent rect. 13 1
896 98.76 wind 1.0 43200 < th dose dependent rect. 4 2
901 98.76 humidity 80.0 1440 < th dose dependent rect. 19 18
915 98.78 humidity 70.0 1440 > th dose independent sin 0 NA
917 98.78 radiation 20.0 1440 < th dose independent rect. 11 1
931 98.78 humidity 90.0 1440 < th dose dependent rect. 3 12
952 98.80 temperature 25.0 4320 > th dose dependent rect. 11 5
982 98.82 precipitation 0.1 43200 > th dose dependent rect. 6 10
995 98.83 wind 3.0 43200 > th dose dependent rect. 22 11
997 98.84 precipitation 0.1 43200 < th dose independent rect. 15 1
999 98.84 temperature 25.0 43200 > th dose independent rect. 9 4