Os11g0707600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sterol 4-alpha-methyl-oxidase (Fragment).
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Os11g0707600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sterol 4-alpha-methyl-oxidase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.84 | 0.39 | 13 | 0.283 | 1.53 | -0.869 | 0.469 | -0.0349 | -0.198 | 5.49 | 12.08 | 10 | -- | -- |
| 68.85 | 0.386 | 13 | 0.284 | 1.53 | -0.869 | 0.465 | -- | -0.197 | 5.5 | 12.12 | 10 | -- | -- |
| 69.38 | 0.388 | 13 | 0.287 | 1.53 | -0.88 | -- | -0.016 | -0.199 | 5.45 | 12.05 | 10 | -- | -- |
| 69.38 | 0.388 | 13 | 0.285 | 1.53 | -0.883 | -- | -- | -0.2 | 5.44 | 12.08 | 10 | -- | -- |
| 181.65 | 0.631 | 13 | 0.328 | -- | -0.773 | -- | -0.0045 | -0.166 | -- | 7.111 | 6 | -- | -- |
| 80.96 | 0.422 | 13 | 0.276 | 1.73 | -- | 0.504 | -- | -0.173 | 7.73 | -- | -- | -- | -- |
| 81.69 | 0.423 | 13 | 0.289 | 1.73 | -- | -- | -- | -0.174 | 7.72 | -- | -- | -- | -- |
| 181.65 | 0.63 | 13 | 0.328 | -- | -0.772 | -- | -- | -0.166 | -- | 7.111 | 6 | -- | -- |
| 71.49 | 0.394 | 13 | -- | 1.54 | -0.886 | -- | -- | -0.23 | 5.44 | 12.68 | 10 | -- | -- |
| 242.58 | 0.728 | 13 | 0.311 | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
| 83.88 | 0.428 | 13 | -- | 1.73 | -- | -- | -- | -0.206 | 7.71 | -- | -- | -- | -- |
| 184.44 | 0.635 | 13 | -- | -- | -0.77 | -- | -- | -0.203 | -- | 6.901 | 2 | -- | -- |
| 245.13 | 0.731 | 13 | -- | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 3 | 65.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 11 | 65.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 16 | 65.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 40 | 65.88 | radiation | 10 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 44 | 66.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 51 | 66.29 | radiation | 10 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 54 | 66.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 60 | 66.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 90 | 66.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 130 | 67.09 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 132 | 67.12 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 150 | 67.26 | radiation | 10 | 90 | < th | dose dependent | rect. | 11 | 6 |
| 187 | 67.53 | radiation | 10 | 10 | < th | dose dependent | sin | 0 | NA |
| 190 | 67.63 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 13 |
| 191 | 67.64 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 15 |
| 195 | 67.68 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 200 | 67.71 | radiation | 20 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 230 | 67.86 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 231 | 67.87 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 270 | 68.04 | atmosphere | 995 | 43200 | < th | dose independent | sin | 7 | NA |
| 273 | 68.05 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 285 | 68.08 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 9 | NA |
| 302 | 68.12 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 308 | 68.15 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 314 | 68.18 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 317 | 68.20 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 321 | 68.21 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 322 | 68.21 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 323 | 68.23 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 337 | 68.27 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 344 | 68.30 | atmosphere | 995 | 43200 | > th | dose independent | sin | 7 | NA |
| 361 | 68.35 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 380 | 68.41 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 407 | 68.53 | radiation | 10 | 10 | < th | dose dependent | rect. | 8 | 9 |
| 408 | 68.53 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 19 |
| 416 | 68.55 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 418 | 68.55 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 434 | 68.58 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 20 |
| 559 | 68.96 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 576 | 69.03 | humidity | 80 | 270 | > th | dose dependent | rect. | 12 | 2 |
| 577 | 69.03 | humidity | 70 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 601 | 69.08 | radiation | 10 | 90 | < th | dose dependent | rect. | 24 | 18 |
| 607 | 69.09 | radiation | 10 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 620 | 69.12 | humidity | 70 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 635 | 69.15 | humidity | 50 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 650 | 69.19 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 669 | 69.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 673 | 69.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 701 | 69.30 | radiation | 10 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 710 | 69.32 | radiation | 10 | 10 | < th | dose dependent | no | NA | NA |
| 730 | 69.36 | radiation | 10 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 745 | 69.39 | radiation | 10 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 753 | 69.40 | radiation | 10 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 755 | 69.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 763 | 69.45 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 774 | 69.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 801 | 69.55 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 832 | 69.60 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 875 | 69.69 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 889 | 69.72 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 896 | 69.76 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 17 | NA |
| 931 | 69.85 | humidity | 80 | 270 | > th | dose independent | rect. | 12 | 2 |
| 977 | 69.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |