BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0707600 Os11g0707600|AK102938
(266 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29390.1 | chr2:12610758-12612799 REVERSE LENGTH=273 413 e-116
AT1G07420.1 | chr1:2277910-2280033 FORWARD LENGTH=267 412 e-115
AT4G12110.1 | chr4:7254197-7256004 FORWARD LENGTH=299 217 5e-57
AT4G22753.1 | chr4:11952019-11953609 REVERSE LENGTH=292 209 9e-55
AT4G22756.1 | chr4:11955124-11956695 REVERSE LENGTH=300 206 7e-54
AT1G69640.1 | chr1:26193933-26195466 REVERSE LENGTH=261 60 2e-09
AT3G02590.1 | chr3:549340-550553 FORWARD LENGTH=280 59 4e-09
AT1G14290.1 | chr1:4880307-4881784 REVERSE LENGTH=260 58 5e-09
AT3G02580.1 | chr3:547048-548615 FORWARD LENGTH=282 55 3e-08
>AT2G29390.1 | chr2:12610758-12612799 REVERSE LENGTH=273
Length = 272
Score = 413 bits (1061), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/269 (71%), Positives = 223/269 (82%), Gaps = 12/269 (4%)
Query: 4 SALDSAWEGLTGSFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTP 63
S ++S W+ L F++FQLA + +F+LHE+VFFLSGLP + ER G + YKIQ KSNTP
Sbjct: 3 SLVESGWKYLVTHFSDFQLACIGSFILHESVFFLSGLPYIFLERTGFLSNYKIQTKSNTP 62
Query: 64 SYQNRCVLRLILYHVCVNLPVMVLSYPAFKFMGLRSSLPLPHWTVIVSQVLFYFVLEDFI 123
Q +C+ RL+LYH CVNLP+M+ SYP F+FMG+ SS PLP W V+ +Q+LFYF++EDF+
Sbjct: 63 EAQGKCIARLLLYHCCVNLPLMMASYPVFRFMGMESSFPLPSWKVVSAQILFYFIIEDFV 122
Query: 124 FYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLFT 183
FYWGHR LHTKWLYK+VHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHL T
Sbjct: 123 FYWGHRILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLIT 182
Query: 184 LWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS------------DFHDYHHRVLYTK 231
LWLWM+LRV+ETVEAH GYHFPWSPSNFLPLYGGS DFHDYHHR+LYTK
Sbjct: 183 LWLWMMLRVIETVEAHCGYHFPWSPSNFLPLYGGSLILMWESFAYSADFHDYHHRLLYTK 242
Query: 232 SGNYASTFVYMDWLFGTDKDYRNAKAIEE 260
SGNY+STFVYMDW+FGTDK YR KA++E
Sbjct: 243 SGNYSSTFVYMDWIFGTDKGYRKLKALKE 271
>AT1G07420.1 | chr1:2277910-2280033 FORWARD LENGTH=267
Length = 266
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 189/259 (72%), Positives = 222/259 (85%)
Query: 3 ASALDSAWEGLTGSFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNT 62
AS ++S W+ L F++FQLA + +FLLHE+VFFLSGLP + ER G +KYKIQ K+NT
Sbjct: 2 ASFVESGWQYLVTHFSDFQLACIGSFLLHESVFFLSGLPFIFLERQGFLSKYKIQTKNNT 61
Query: 63 PSYQNRCVLRLILYHVCVNLPVMVLSYPAFKFMGLRSSLPLPHWTVIVSQVLFYFVLEDF 122
P+ Q +C+ RL+LYH VNLP+M+ SYP F+ MG+RSS PLP W + +Q+LFYF++EDF
Sbjct: 62 PAAQGKCITRLLLYHFSVNLPLMLASYPVFRAMGMRSSFPLPSWKEVSAQILFYFIIEDF 121
Query: 123 IFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLF 182
+FYWGHR LH+KWLYK+VHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHL
Sbjct: 122 VFYWGHRILHSKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLI 181
Query: 183 TLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYM 242
TLWLWMVLRVLETVEAH GYHFPWS SNFLPLYGG+DFHDYHHR+LYTKSGNY+STFVYM
Sbjct: 182 TLWLWMVLRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYM 241
Query: 243 DWLFGTDKDYRNAKAIEEK 261
DW+FGTDK YR K ++E
Sbjct: 242 DWIFGTDKGYRRLKTLKEN 260
>AT4G12110.1 | chr4:7254197-7256004 FORWARD LENGTH=299
Length = 298
Score = 217 bits (553), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 148/233 (63%), Gaps = 5/233 (2%)
Query: 34 VFFLSGLPSLLFE----RFGLFAKYKIQKKSN-TPSYQNRCVLRLILYHVCVNLPVMVLS 88
VF L LP + E GLF +YKIQ K N + S +C ++ + V P+ ++S
Sbjct: 48 VFSLVPLPLVFVELARSASGLFNRYKIQPKVNYSLSDMFKCYKDVMTMFILVVGPLQLVS 107
Query: 89 YPAFKFMGLRSSLPLPHWTVIVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYA 148
YP+ + + +RS LPLP T ++SQ++ YF++ED+ YW HR H+KW Y +H VHHEY
Sbjct: 108 YPSIQMIEIRSGLPLPTITEMLSQLVVYFLIEDYTNYWVHRFFHSKWGYDKIHRVHHEYT 167
Query: 149 TPFGLTSEYAHPAEILFLGFATIVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSP 208
P G + YAH AE+L LG T +GPA+ H+ T WLW+ LR +E +E HSGY FPWSP
Sbjct: 168 APIGYAAPYAHWAEVLLLGIPTFMGPAIAPGHMITFWLWIALRQMEAIETHSGYDFPWSP 227
Query: 209 SNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRNAKAIEEK 261
+ ++P YGG+++HDYHH V N+AS F Y D+++GTDK YR K + E+
Sbjct: 228 TKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRFQKKLLEQ 280
>AT4G22753.1 | chr4:11952019-11953609 REVERSE LENGTH=292
Length = 291
Score = 209 bits (533), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 146/233 (62%), Gaps = 1/233 (0%)
Query: 27 TFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSN-TPSYQNRCVLRLILYHVCVNLPVM 85
T L+ VF L+ P ++ E G F ++KIQKK + S +C ++ + V +
Sbjct: 41 TILVLFLVFSLAPFPLVIVEWTGWFDQFKIQKKVKYSLSDMFQCYKEVMKLFLLVVGTLQ 100
Query: 86 VLSYPAFKFMGLRSSLPLPHWTVIVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHH 145
++SYP+ + +G+RS LPLP IV+Q++ YF++ED+ YW HR +H KW Y+ +H +HH
Sbjct: 101 IVSYPSIQMVGIRSGLPLPSLMEIVAQLVVYFLIEDYTNYWIHRWMHCKWGYEKIHRIHH 160
Query: 146 EYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFP 205
EY +P G S YAH AEIL LG T +GPA+ H+ T WLW+ LR E +E HSGY FP
Sbjct: 161 EYTSPIGYASPYAHWAEILILGIPTFLGPAIAPGHIMTFWLWISLRQFEAIETHSGYDFP 220
Query: 206 WSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRNAKAI 258
WS + +P YGG ++HDYHH V N+AS F Y D+++GTDK YR K +
Sbjct: 221 WSVTKLIPFYGGPEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRIHKKL 273
>AT4G22756.1 | chr4:11955124-11956695 REVERSE LENGTH=300
Length = 299
Score = 206 bits (525), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 144/233 (61%), Gaps = 5/233 (2%)
Query: 34 VFFLSGLPSLLFERF----GLFAKYKIQKK-SNTPSYQNRCVLRLILYHVCVNLPVMVLS 88
+F L LP + E LF +YKIQ K N+ S +C ++ + V P+ ++S
Sbjct: 48 IFSLVPLPLVFIESSQSTSDLFNRYKIQPKVKNSFSSMFKCYKDVMKMFILVVGPLQLVS 107
Query: 89 YPAFKFMGLRSSLPLPHWTVIVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYA 148
YP+ + + +RS LPLP IV+Q++ YF++ED+ YW HR H KW Y+ H +HHEY
Sbjct: 108 YPSIQMIEIRSGLPLPSCMEIVAQLVVYFLVEDYTNYWVHRFFHCKWGYEKFHHIHHEYT 167
Query: 149 TPFGLTSEYAHPAEILFLGFATIVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSP 208
P G + YAH AE+L LG T +GPA+ H+ T WLW+ LR +E +E HSGY FPWS
Sbjct: 168 APIGYAAPYAHWAEVLLLGIPTFLGPAIAPGHMITFWLWIALRQIEAIETHSGYDFPWSL 227
Query: 209 SNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRNAKAIEEK 261
+ ++P YGG+++HDYHH V N+AS F Y D+++GTDK YR K + ++
Sbjct: 228 TKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRFQKKLLQQ 280
>AT1G69640.1 | chr1:26193933-26195466 REVERSE LENGTH=261
Length = 260
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 108 VIVSQVLFYFVLEDFIFYWGHRALH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFL 166
V+ Q + ++ D Y+ HR +H K+LYKH+HS HH P+ + Y HP E L L
Sbjct: 94 VLARQFVTAMIVLDTWQYFMHRYMHQNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLL 153
Query: 167 GFATIVGPAL----TGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNF--LPLYGGSDF 220
+G AL +G T + ++TV+ H G W P N + S +
Sbjct: 154 ---DTIGGALSFLVSGMSPRTSIFFFSFATIKTVDDHCGL---WLPGNLFHMVFKNNSAY 207
Query: 221 HDYHHRVLYTKSGNYASTFVYMDWLFGT 248
HD HH++ TK FV D + GT
Sbjct: 208 HDIHHQLYGTKYNFSQPFFVMWDRILGT 235
>AT3G02590.1 | chr3:549340-550553 FORWARD LENGTH=280
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 99 SSLPLPHWTVIVSQVLFYFVLEDFIFYWGHRALH-TKWLYKHVHSVHHEYATPFGLTSEY 157
S+L +W + + Y VL +F+ YW H+ LH K+LYKH+H+ HH Y L S +
Sbjct: 119 STLDHFNWFLCFLYIALYLVLVEFMIYWVHKELHDIKFLYKHLHATHHMYNKQNTL-SPF 177
Query: 158 A----HPAEILFLGFATIVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLP 213
A HP + + ++ + HL T + L + T H H N P
Sbjct: 178 AGLAFHPLDGILQAIPHVIALFIVPIHLITHLSLLFLEGIWTASIHDCIH-----GNIWP 232
Query: 214 LYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGT 248
+ G +H HH T NY ++MDW+FG+
Sbjct: 233 IMGAG-YHTIHHT---TYKHNYGHYTIWMDWMFGS 263
>AT1G14290.1 | chr1:4880307-4881784 REVERSE LENGTH=260
Length = 259
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 125 YWGHRALH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAL----TGP 179
Y+ HR +H K+LYKH+HS HH P+ + Y HP E L L +G AL +G
Sbjct: 110 YFIHRYMHLNKFLYKHIHSQHHRLIVPYSYGALYNHPLEGLLL---DTIGGALSFLFSGM 166
Query: 180 HLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTF 239
T + ++TV+ H G P +P + S +HD HH++ TK F
Sbjct: 167 SPRTAIFFFSFATIKTVDDHCGLWLPGNPFHIF-FSNNSAYHDVHHQLYGTKYNFSQPFF 225
Query: 240 VYMDWLFGT 248
V D + GT
Sbjct: 226 VMWDRILGT 234
>AT3G02580.1 | chr3:547048-548615 FORWARD LENGTH=282
Length = 281
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
Query: 106 WTVIVSQVLFYFVLEDFIFYWGHRALH-TKWLYKHVHSVHHEYATPFGLTSEYA----HP 160
W + + Y V +F YW HR LH K LYK++H+ HH Y L S +A HP
Sbjct: 125 WILYFVYIAIYLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTL-SPFAGLAFHP 183
Query: 161 AEILFLGFATIVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDF 220
+ + ++ + H T + + + T H H N P+ G +
Sbjct: 184 VDGILQAVPHVIALFIVPIHFTTHIGLLFMEAIWTANIHDCIH-----GNIWPVMGAG-Y 237
Query: 221 HDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRNAKAIEEKDGK 264
H HH T NY ++MDW+FG+ +D +EE D K
Sbjct: 238 HTIHHT---TYKHNYGHYTIWMDWMFGSLRD----PLLEEDDNK 274
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.141 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,246,938
Number of extensions: 269831
Number of successful extensions: 666
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 658
Number of HSP's successfully gapped: 10
Length of query: 266
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 169
Effective length of database: 8,447,217
Effective search space: 1427579673
Effective search space used: 1427579673
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 111 (47.4 bits)