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Os11g0703600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.26 (0.0378) R2 : 0.711
β1 : -2.49 (0.14) R2dD : 0.212 R2D : 0.16
β2 : 1.49 (0.112) R2dC : 0.176 R2C : 0.375
β3 : 1.62 (0.124) R2dE : 0.168 R2E : 0.332
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0498 (0.0809) R2dN8 : 0.000376 R2N8 : -0.0031
σ : 0.707
deviance : 230.59
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C
peak time of C : 23.9
E
wheather : temperature
threshold : 21.32
memory length : 694
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.9
open length of G : 0.733

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
231.44 0.715 6.26 -2.39 1.46 1.58 0.199 0.679 -0.038 23.9 20.78 706 17.6 1.4
230.2 0.707 6.25 -2.46 1.49 1.59 0.455 -- -0.0624 23.9 21.73 699 17.8 0.799
231.14 0.708 6.25 -2.35 1.47 1.61 -- 0.876 -0.0434 23.8 21.38 702 17.6 1.31
230.59 0.707 6.26 -2.49 1.49 1.62 -- -- -0.0498 23.9 21.32 694 17.9 0.733
261.56 0.753 6.26 -2.24 -- 2.68 -- 1.61 0.109 -- 13.85 709 17.6 0.982
310.05 0.825 6.27 -2.22 2.37 -- 0.763 -- 0.00164 0.186 -- -- -- --
312.56 0.828 6.28 -2.25 2.37 -- -- -- -0.00164 0.165 -- -- -- --
247.85 0.733 6.27 -2.59 -- 2.71 -- -- -0.0681 -- 11.49 742 16.3 2.9
392.01 0.922 6.26 -- 1.56 1.3 -- -- 0.0205 23.9 20.5 670 18.6 0.0167
666.57 1.21 6.23 -2.17 -- -- -- -- 0.0336 -- -- -- -- --
446.11 0.988 6.22 -- 2.34 -- -- -- 0.249 0.112 -- -- -- --
418.26 0.953 6.17 -- -- 2.47 -- -- 0.257 -- 9.506 730 16.5 2.9
791.3 1.31 6.17 -- -- -- -- -- 0.275 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 235.28 temperature 20 720 > th dose dependent rect. 17 2
2 235.62 temperature 10 720 > th dose dependent rect. 16 9
4 236.24 temperature 20 720 > th dose dependent rect. 17 6
16 237.86 radiation 10 14400 > th dose independent rect. 5 1
30 238.12 temperature 30 720 < th dose dependent rect. 19 2
32 238.22 temperature 30 720 < th dose dependent rect. 18 5
35 238.38 radiation 30 14400 < th dose independent rect. 16 11
44 238.95 radiation 30 14400 < th dose independent rect. 16 9
60 239.88 radiation 30 14400 < th dose independent rect. 16 3
73 240.45 temperature 25 720 > th dose dependent rect. 17 15
135 244.13 radiation 20 1440 < th dose dependent rect. 18 9
145 244.89 radiation 30 14400 > th dose dependent rect. 16 16
174 246.92 temperature 25 720 > th dose dependent sin 12 NA
180 247.29 radiation 10 1440 < th dose dependent rect. 18 7
185 247.36 radiation 1 720 > th dose dependent rect. 18 11
190 247.60 radiation 20 14400 > th dose dependent rect. 17 14
193 247.72 radiation 20 14400 > th dose dependent rect. 6 1
207 247.75 temperature 25 720 > th dose independent rect. 16 8
208 247.76 temperature 10 720 > th dose dependent sin 15 NA
209 247.76 temperature 20 720 > th dose dependent sin 15 NA
211 247.79 temperature 25 720 < th dose independent rect. 17 7
212 247.90 humidity 70 720 > th dose independent rect. 18 13
221 248.20 humidity 70 720 > th dose independent rect. 18 6
225 248.24 temperature 25 720 > th dose independent rect. 17 2
256 248.93 humidity 70 720 < th dose independent rect. 18 13
293 249.43 humidity 70 720 < th dose independent rect. 18 2
306 249.47 humidity 70 720 < th dose dependent rect. 18 13
307 249.49 radiation 10 1440 < th dose dependent rect. 18 1
314 249.64 humidity 70 720 < th dose dependent rect. 18 2
327 249.84 wind 5 43200 > th dose dependent rect. 21 19
340 250.09 radiation 1 1440 > th dose dependent rect. 18 1
363 250.17 temperature 30 720 < th dose dependent sin 15 NA
376 250.46 radiation 1 720 > th dose independent rect. 17 2
387 250.47 wind 5 43200 > th dose independent rect. 22 18
391 250.50 radiation 30 4320 < th dose independent rect. 7 1
393 250.53 wind 5 43200 < th dose independent rect. 22 18
475 251.24 wind 5 43200 > th dose dependent sin 4 NA
482 251.36 temperature 20 90 > th dose independent rect. 15 14
486 251.39 temperature 10 90 > th dose dependent rect. 15 14
492 251.41 wind 7 43200 > th dose dependent rect. 15 23
517 251.59 wind 7 43200 < th dose independent sin 6 NA
530 251.67 radiation 30 14400 > th dose independent rect. 16 16
539 251.71 wind 7 43200 > th dose dependent rect. 12 22
548 251.76 wind 7 43200 > th dose independent sin 6 NA
567 251.85 wind 7 43200 > th dose dependent rect. 1 23
578 251.90 wind 7 43200 > th dose dependent no NA NA
583 251.90 wind 7 43200 > th dose dependent rect. 6 23
585 251.91 wind 9 43200 < th dose independent rect. 12 22
588 251.92 wind 9 43200 > th dose independent rect. 12 22
602 251.98 wind 9 43200 > th dose independent rect. 14 19
603 251.98 wind 9 43200 > th dose dependent rect. 12 20
613 252.02 wind 5 43200 > th dose independent sin 12 NA
621 252.04 radiation 30 4320 < th dose independent rect. 21 11
636 252.09 wind 7 43200 > th dose dependent rect. 23 23
638 252.10 wind 7 43200 > th dose dependent rect. 4 23
651 252.17 wind 5 43200 < th dose independent sin 12 NA
660 252.20 wind 9 43200 < th dose independent rect. 15 23
676 252.21 wind 9 43200 < th dose independent rect. 14 19
701 252.31 wind 5 43200 > th dose independent rect. 13 22
719 252.37 radiation 20 14400 < th dose independent rect. 3 3
726 252.40 temperature 30 720 < th dose independent rect. 17 14
755 252.48 wind 5 43200 > th dose dependent sin 12 NA
773 252.50 wind 9 43200 < th dose independent rect. 1 23
819 252.65 wind 9 43200 < th dose independent no NA NA
826 252.67 wind 9 43200 > th dose independent rect. 19 23
827 252.67 wind 9 43200 < th dose independent rect. 19 23
829 252.68 wind 5 43200 > th dose independent no NA NA
831 252.69 wind 9 43200 > th dose independent rect. 7 23
837 252.70 wind 9 43200 > th dose independent sin 13 NA
849 252.72 radiation 30 14400 > th dose dependent rect. 16 1
866 252.73 wind 9 43200 > th dose independent no NA NA
867 252.73 wind 9 43200 > th dose independent rect. 1 22
878 252.76 wind 5 43200 > th dose independent rect. 10 23
882 252.77 wind 9 43200 < th dose independent rect. 7 23
887 252.79 wind 5 43200 > th dose independent sin 3 NA
896 252.80 wind 5 43200 > th dose independent rect. 6 23
899 252.80 wind 7 43200 > th dose dependent rect. 6 18
906 252.82 wind 5 43200 < th dose independent rect. 13 22
915 252.83 wind 9 43200 < th dose independent rect. 23 23
929 252.88 wind 9 43200 < th dose independent sin 12 NA
938 252.89 wind 9 43200 > th dose independent rect. 4 23
944 252.90 wind 5 43200 > th dose independent rect. 1 23
952 252.92 wind 5 43200 < th dose independent sin 3 NA