Os11g0701600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 18 protein.
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Os11g0701600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 18 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.66 | 0.569 | 7.8 | 0.603 | 0.35 | 2.47 | -0.397 | 1.57 | 0.121 | 10.4 | 25.1 | 779 | -- | -- |
| 149.6 | 0.57 | 7.79 | 0.862 | 0.343 | 2.29 | -0.0686 | -- | 0.142 | 10.4 | 25.61 | 772 | -- | -- |
| 147.21 | 0.565 | 7.8 | 0.621 | 0.359 | 2.47 | -- | 1.39 | 0.128 | 9.98 | 25.13 | 791 | -- | -- |
| 149.38 | 0.569 | 7.77 | 0.871 | 0.344 | 2.34 | -- | -- | 0.191 | 10.1 | 25.5 | 796 | -- | -- |
| 153.19 | 0.576 | 7.79 | 0.676 | -- | 2.63 | -- | 1.33 | 0.191 | -- | 25.82 | 780 | -- | -- |
| 229.76 | 0.711 | 7.87 | 0.209 | 0.708 | -- | -0.134 | -- | -0.314 | 10.3 | -- | -- | -- | -- |
| 229.84 | 0.71 | 7.87 | 0.203 | 0.709 | -- | -- | -- | -0.315 | 10.3 | -- | -- | -- | -- |
| 154.85 | 0.58 | 7.76 | 0.918 | -- | 2.52 | -- | -- | 0.245 | -- | 26.38 | 784 | -- | -- |
| 167.22 | 0.602 | 7.81 | -- | 0.394 | 2.07 | -- | -- | 0.0689 | 10.1 | 25.75 | 788 | -- | -- |
| 260.48 | 0.754 | 7.89 | 0.192 | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
| 230.93 | 0.711 | 7.88 | -- | 0.708 | -- | -- | -- | -0.337 | 10.3 | -- | -- | -- | -- |
| 174.44 | 0.615 | 7.8 | -- | -- | 2.15 | -- | -- | 0.0717 | -- | 26.36 | 764 | -- | -- |
| 261.46 | 0.755 | 7.9 | -- | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.26 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 2 | 145.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 4 | 146.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 5 | 146.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 7 | 146.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 28 | 146.84 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 38 | 147.03 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 39 | 147.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 45 | 147.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 58 | 147.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 79 | 147.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 88 | 148.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 152 | 149.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 173 | 149.45 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 183 | 149.55 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 211 | 149.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 268 | 150.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 389 | 151.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 480 | 152.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 620 | 153.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 811 | 154.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 980 | 155.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |