Os11g0695900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os11g0695900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.77 | 0.293 | 9.88 | 0.483 | 0.792 | -0.648 | -0.108 | -0.0581 | 0.386 | 16.4 | 28.71 | 120 | -- | -- |
| 38.77 | 0.29 | 9.88 | 0.478 | 0.789 | -0.652 | -0.0865 | -- | 0.378 | 16.4 | 28.5 | 125 | -- | -- |
| 38.78 | 0.29 | 9.88 | 0.47 | 0.797 | -0.647 | -- | -0.0308 | 0.385 | 16.4 | 28.39 | 133 | -- | -- |
| 38.77 | 0.29 | 9.88 | 0.472 | 0.796 | -0.645 | -- | -- | 0.382 | 16.4 | 28.38 | 138 | -- | -- |
| 64.25 | 0.373 | 9.9 | 0.281 | -- | -1.51 | -- | 0.142 | 0.289 | -- | 149.1 | 148 | -- | -- |
| 44.45 | 0.313 | 9.85 | 0.636 | 0.985 | -- | -0.0537 | -- | 0.518 | 16.2 | -- | -- | -- | -- |
| 44.46 | 0.312 | 9.85 | 0.635 | 0.985 | -- | -- | -- | 0.518 | 16.2 | -- | -- | -- | -- |
| 64.27 | 0.373 | 9.89 | 0.301 | -- | -1.5 | -- | -- | 0.294 | -- | 154.3 | 148 | -- | -- |
| 44.07 | 0.309 | 9.9 | -- | 0.747 | -0.795 | -- | -- | 0.302 | 16.3 | 28.26 | 162 | -- | -- |
| 97.03 | 0.46 | 9.85 | 0.596 | -- | -- | -- | -- | 0.491 | -- | -- | -- | -- | -- |
| 55.1 | 0.347 | 9.87 | -- | 0.973 | -- | -- | -- | 0.447 | 16.2 | -- | -- | -- | -- |
| 65.07 | 0.376 | 9.89 | -- | -- | -1.39 | -- | -- | 0.161 | -- | 29.76 | 139 | -- | -- |
| 106.39 | 0.481 | 9.86 | -- | -- | -- | -- | -- | 0.425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 5 | 37.14 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 33 | 37.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 78 | 38.20 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 81 | 38.22 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 96 | 38.28 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 117 | 38.43 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 16 |
| 118 | 38.45 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 140 | 38.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 144 | 38.54 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 166 | 38.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 167 | 38.60 | temperature | 25.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 168 | 38.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 179 | 38.65 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 180 | 38.65 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 185 | 38.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 189 | 38.68 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 199 | 38.71 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 204 | 38.71 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 239 | 38.76 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 240 | 38.76 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 257 | 38.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 258 | 38.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 287 | 38.82 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 299 | 38.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 325 | 38.87 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 347 | 38.90 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 369 | 38.92 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 387 | 38.95 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 394 | 38.96 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 395 | 38.96 | temperature | 30.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 420 | 38.98 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 435 | 39.01 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 459 | 39.04 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 462 | 39.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 471 | 39.05 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 498 | 39.07 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 547 | 39.12 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 577 | 39.15 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 601 | 39.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 617 | 39.18 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 632 | 39.19 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 673 | 39.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 10 |
| 674 | 39.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 12 | 12 |
| 692 | 39.23 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 9 | 8 |
| 714 | 39.24 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 732 | 39.25 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 771 | 39.27 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 798 | 39.29 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 841 | 39.31 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 864 | 39.32 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 873 | 39.32 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 880 | 39.33 | temperature | 20.0 | 4320 | < th | dose independent | sin | 18 | NA |
| 911 | 39.35 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 919 | 39.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 979 | 39.38 | temperature | 20.0 | 1440 | > th | dose independent | sin | 0 | NA |