Os11g0688200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0688200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212.59 | 0.685 | 2.7 | 0.34 | 0.0976 | -9.71 | -0.117 | 30.6 | -0.118 | 10.7 | 45 | 385 | -- | -- |
| 219.69 | 0.69 | 2.85 | 0.103 | 0.0939 | 2.16 | 1.27 | -- | -0.19 | 15.9 | 44.27 | 310 | -- | -- |
| 212.48 | 0.679 | 2.69 | 0.35 | 0.0922 | -9.84 | -- | 30.8 | -0.114 | 10.9 | 44.24 | 385 | -- | -- |
| 213.39 | 0.68 | 2.82 | 0.0445 | 0.0347 | 2.75 | -- | -- | -0.12 | 16 | 45 | 397 | -- | -- |
| 213.02 | 0.68 | 2.69 | 0.354 | -- | -9.96 | -- | 31.1 | -0.119 | -- | 44.19 | 386 | -- | -- |
| 234.67 | 0.718 | 2.82 | 0.221 | 0.0779 | -- | 0.838 | -- | -0.134 | 17.3 | -- | -- | -- | -- |
| 235.74 | 0.719 | 2.82 | 0.222 | 0.131 | -- | -- | -- | -0.129 | 13.7 | -- | -- | -- | -- |
| 213.45 | 0.68 | 2.82 | 0.0464 | -- | 2.75 | -- | -- | -0.118 | -- | 45 | 397 | -- | -- |
| 213.03 | 0.68 | 2.82 | -- | 0.103 | 2.82 | -- | -- | -0.11 | 11.6 | 45 | 398 | -- | -- |
| 236.79 | 0.719 | 2.82 | 0.217 | -- | -- | -- | -- | -0.132 | -- | -- | -- | -- | -- |
| 237.04 | 0.72 | 2.82 | -- | 0.127 | -- | -- | -- | -0.154 | 13.7 | -- | -- | -- | -- |
| 213.5 | 0.681 | 2.81 | -- | -- | 2.77 | -- | -- | -0.121 | -- | 44.97 | 397 | -- | -- |
| 238.03 | 0.72 | 2.82 | -- | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.36 | humidity | 50 | 90 | < th | dose independent | rect. | 14 | 21 |
| 3 | 207.94 | humidity | 50 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 4 | 208.18 | humidity | 50 | 90 | < th | dose dependent | sin | 11 | NA |
| 6 | 208.71 | humidity | 50 | 30 | < th | dose dependent | rect. | 15 | 3 |
| 24 | 208.78 | humidity | 50 | 30 | < th | dose independent | sin | 11 | NA |
| 25 | 208.84 | humidity | 50 | 30 | < th | dose independent | rect. | 15 | 3 |
| 43 | 208.84 | humidity | 50 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 62 | 208.87 | humidity | 50 | 90 | < th | dose independent | rect. | 15 | 1 |
| 110 | 209.07 | wind | 1 | 10 | < th | dose independent | rect. | 14 | 2 |
| 113 | 209.07 | wind | 1 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 219 | 209.98 | humidity | 50 | 90 | > th | dose independent | sin | 12 | NA |
| 243 | 215.04 | humidity | 90 | 90 | > th | dose independent | rect. | 9 | 1 |
| 244 | 215.04 | humidity | 90 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 246 | 215.32 | humidity | 50 | 270 | > th | dose independent | rect. | 6 | 23 |
| 281 | 216.13 | temperature | 25 | 10 | < th | dose independent | rect. | 20 | 1 |
| 283 | 216.17 | temperature | 25 | 90 | < th | dose independent | rect. | 18 | 1 |
| 286 | 216.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 291 | 216.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 3 |
| 319 | 216.86 | humidity | 50 | 270 | < th | dose independent | rect. | 14 | 23 |
| 377 | 217.86 | humidity | 50 | 270 | > th | dose independent | sin | 18 | NA |
| 400 | 217.97 | humidity | 50 | 270 | < th | dose independent | sin | 19 | NA |
| 402 | 217.99 | humidity | 50 | 270 | < th | dose dependent | rect. | 10 | 6 |
| 436 | 218.00 | humidity | 50 | 270 | < th | dose dependent | no | NA | NA |
| 598 | 218.08 | humidity | 50 | 270 | < th | dose independent | rect. | 11 | 5 |
| 600 | 218.08 | humidity | 50 | 270 | < th | dose independent | rect. | 11 | 23 |
| 601 | 218.08 | humidity | 50 | 270 | < th | dose dependent | sin | 21 | NA |
| 670 | 218.13 | humidity | 50 | 270 | < th | dose independent | no | NA | NA |
| 801 | 218.23 | humidity | 50 | 270 | > th | dose independent | rect. | 17 | 23 |
| 810 | 218.36 | humidity | 50 | 270 | > th | dose independent | no | NA | NA |
| 843 | 218.56 | humidity | 50 | 270 | > th | dose independent | rect. | 7 | 9 |
| 849 | 218.65 | temperature | 30 | 30 | > th | dose independent | rect. | 14 | 3 |
| 875 | 219.13 | humidity | 50 | 270 | > th | dose independent | rect. | 19 | 23 |
| 918 | 219.37 | wind | 7 | 30 | > th | dose independent | rect. | 19 | 1 |
| 985 | 219.92 | wind | 3 | 90 | < th | dose dependent | rect. | 14 | 6 |
| 987 | 219.96 | humidity | 50 | 270 | > th | dose independent | rect. | 20 | 20 |