Os11g0686100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0686100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.07 | 0.262 | 13.7 | 0.934 | 0.46 | -0.69 | -0.145 | -0.401 | 0.497 | 22.5 | 24.21 | 14 | -- | -- |
| 31.15 | 0.26 | 13.7 | 0.985 | 0.46 | -0.722 | -0.117 | -- | 0.511 | 22.4 | 24.2 | 14 | -- | -- |
| 31.14 | 0.26 | 13.7 | 0.955 | 0.46 | -0.693 | -- | -0.277 | 0.502 | 22.5 | 24.2 | 12 | -- | -- |
| 31.18 | 0.26 | 13.7 | 0.991 | 0.457 | -0.718 | -- | -- | 0.513 | 22.5 | 24.2 | 12 | -- | -- |
| 42.61 | 0.306 | 13.7 | 1.04 | -- | -0.955 | -- | 0.125 | 0.542 | -- | 24.1 | 10 | -- | -- |
| 39.14 | 0.293 | 13.8 | 0.876 | 0.631 | -- | 0.0944 | -- | 0.428 | 0.149 | -- | -- | -- | -- |
| 39.17 | 0.293 | 13.8 | 0.872 | 0.631 | -- | -- | -- | 0.428 | 0.131 | -- | -- | -- | -- |
| 42.62 | 0.305 | 13.7 | 1.03 | -- | -0.946 | -- | -- | 0.538 | -- | 24.1 | 10 | -- | -- |
| 55.53 | 0.349 | 13.8 | -- | 0.526 | -0.501 | -- | -- | 0.343 | 23.4 | 26.04 | 9 | -- | -- |
| 64.24 | 0.375 | 13.7 | 0.892 | -- | -- | -- | -- | 0.437 | -- | -- | -- | -- | -- |
| 59.22 | 0.36 | 13.8 | -- | 0.643 | -- | -- | -- | 0.331 | 0.205 | -- | -- | -- | -- |
| 69.64 | 0.39 | 13.7 | -- | -- | -0.803 | -- | -- | 0.395 | -- | 24.6 | 5 | -- | -- |
| 85.24 | 0.431 | 13.8 | -- | -- | -- | -- | -- | 0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.22 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 6 |
| 19 | 30.81 | temperature | 30 | 720 | > th | dose independent | sin | 7 | NA |
| 21 | 30.98 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 24 | 31.08 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 25 | 31.09 | temperature | 30 | 720 | < th | dose independent | sin | 7 | NA |
| 27 | 31.14 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 28 | 31.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 43 | 31.17 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 45 | 31.18 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 65 | 31.25 | temperature | 30 | 720 | < th | dose independent | rect. | 21 | 17 |
| 66 | 31.25 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 68 | 31.26 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 76 | 31.30 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 86 | 31.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 105 | 31.42 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 108 | 31.44 | temperature | 20 | 10 | > th | dose dependent | sin | 0 | NA |
| 124 | 31.49 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 126 | 31.50 | temperature | 30 | 720 | > th | dose dependent | sin | 7 | NA |
| 137 | 31.54 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 229 | 31.72 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 236 | 31.75 | temperature | 25 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 262 | 31.79 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 15 |
| 467 | 32.11 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 20 |
| 531 | 32.20 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 545 | 32.24 | temperature | 30 | 720 | > th | dose dependent | rect. | 13 | 1 |
| 650 | 32.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 668 | 32.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 680 | 32.53 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 1 |
| 754 | 32.65 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 759 | 32.66 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 22 |