Os11g0678200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0678200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.92 | 0.46 | 3.25 | 0.58 | 0.00341 | 12.1 | -0.211 | 24.9 | 0.0462 | 21.1 | 18.63 | 254 | -- | -- |
| 113.2 | 0.499 | 3.09 | 0.233 | 0.0455 | 0.388 | 0.473 | -- | 0.0208 | 7.45 | 18.63 | 254 | -- | -- |
| 95.93 | 0.456 | 3.25 | 0.576 | 0.00335 | 12.3 | -- | 25.3 | 0.0423 | 21.1 | 18.57 | 247 | -- | -- |
| 111.66 | 0.492 | 3.08 | 0.322 | 0.0344 | 0.621 | -- | -- | 0.0588 | 6.53 | 21 | 306 | -- | -- |
| 95.89 | 0.456 | 3.24 | 0.61 | -- | 12.7 | -- | 25.9 | 0.046 | -- | 18.54 | 247 | -- | -- |
| 113.83 | 0.5 | 3.09 | 0.189 | 0.0408 | -- | 0.494 | -- | 0.00799 | 7.62 | -- | -- | -- | -- |
| 114.28 | 0.501 | 3.09 | 0.198 | 0.0766 | -- | -- | -- | 0.00585 | 4.07 | -- | -- | -- | -- |
| 111.71 | 0.492 | 3.08 | 0.324 | -- | 0.629 | -- | -- | 0.0608 | -- | 21.02 | 307 | -- | -- |
| 113.97 | 0.497 | 3.09 | -- | 0.0635 | 0.423 | -- | -- | 0.018 | 4.06 | 21 | 308 | -- | -- |
| 114.6 | 0.5 | 3.09 | 0.202 | -- | -- | -- | -- | 0.00789 | -- | -- | -- | -- | -- |
| 115.32 | 0.502 | 3.1 | -- | 0.0805 | -- | -- | -- | -0.0163 | 4.03 | -- | -- | -- | -- |
| 114.15 | 0.498 | 3.09 | -- | -- | 0.422 | -- | -- | 0.0127 | -- | 21.14 | 293 | -- | -- |
| 115.68 | 0.502 | 3.1 | -- | -- | -- | -- | -- | -0.0145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.07 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 97.22 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 16 | 97.22 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 30 | 97.27 | wind | 5.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 31 | 97.27 | wind | 3.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 32 | 97.27 | wind | 5.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 50 | 99.00 | wind | 5.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 69 | 99.98 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 82 | 100.35 | wind | 5.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 84 | 100.40 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 89 | 100.44 | wind | 5.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 100 | 100.63 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 131 | 101.11 | temperature | 20.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 204 | 103.07 | humidity | 90.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 225 | 103.65 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 294 | 104.85 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 356 | 105.03 | temperature | 20.0 | 270 | < th | dose dependent | no | NA | NA |
| 419 | 105.71 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 460 | 106.14 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 461 | 106.16 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 467 | 106.28 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 470 | 106.29 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 496 | 106.76 | wind | 1.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 506 | 106.98 | humidity | 60.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 523 | 107.14 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 529 | 107.29 | temperature | 20.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 531 | 107.29 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 533 | 107.30 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 534 | 107.30 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 536 | 107.31 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 537 | 107.32 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 539 | 107.32 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 541 | 107.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 544 | 107.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 548 | 107.33 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 554 | 107.33 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 555 | 107.33 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 576 | 107.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 581 | 107.33 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 584 | 107.34 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 585 | 107.34 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 588 | 107.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 590 | 107.34 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 591 | 107.34 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 594 | 107.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 595 | 107.34 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 597 | 107.34 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 602 | 107.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 603 | 107.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 604 | 107.34 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 609 | 107.34 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 611 | 107.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 616 | 107.35 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 620 | 107.37 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 621 | 107.38 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 629 | 107.40 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 634 | 107.42 | wind | 1.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 676 | 107.57 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 755 | 107.74 | temperature | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 759 | 107.75 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 760 | 107.76 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 763 | 107.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 764 | 107.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 790 | 107.87 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 791 | 107.87 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 792 | 107.87 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 804 | 107.92 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 812 | 107.96 | temperature | 30.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 833 | 107.99 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 843 | 108.03 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 844 | 108.03 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 911 | 108.17 | wind | 3.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 917 | 108.19 | humidity | 50.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 946 | 108.25 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 954 | 108.28 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 975 | 108.34 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 985 | 108.40 | radiation | 1.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 986 | 108.40 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 4 |
| 1000 | 108.42 | temperature | 20.0 | 270 | < th | dose independent | sin | 5 | NA |