Os11g0677500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0677500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 308.49 | 0.825 | 5.67 | -1.85 | 0.403 | -1.83 | -0.0868 | -0.228 | 0.71 | 14.1 | 24.79 | 4177 | -- | -- |
| 308.5 | 0.818 | 5.66 | -1.8 | 0.398 | -1.86 | -0.0951 | -- | 0.719 | 14.2 | 24.8 | 4153 | -- | -- |
| 308.52 | 0.818 | 5.67 | -1.85 | 0.402 | -1.83 | -- | -0.208 | 0.71 | 14.1 | 24.8 | 4176 | -- | -- |
| 308.53 | 0.818 | 5.66 | -1.8 | 0.398 | -1.86 | -- | -- | 0.72 | 14.2 | 24.8 | 4157 | -- | -- |
| 317.26 | 0.83 | 5.67 | -1.82 | -- | -1.89 | -- | -0.121 | 0.716 | -- | 24.8 | 4071 | -- | -- |
| 408.5 | 0.948 | 5.68 | -2.41 | 0.577 | -- | 0.144 | -- | 0.625 | 13.9 | -- | -- | -- | -- |
| 408.58 | 0.947 | 5.68 | -2.4 | 0.577 | -- | -- | -- | 0.626 | 13.9 | -- | -- | -- | -- |
| 317.14 | 0.829 | 5.66 | -1.78 | -- | -1.95 | -- | -- | 0.733 | -- | 24.6 | 4064 | -- | -- |
| 368.57 | 0.894 | 5.53 | -- | 0.469 | -2.85 | -- | -- | 1.31 | 13.7 | 7.769 | 4342 | -- | -- |
| 428.72 | 0.968 | 5.69 | -2.43 | -- | -- | -- | -- | 0.613 | -- | -- | -- | -- | -- |
| 560.89 | 1.11 | 5.62 | -- | 0.622 | -- | -- | -- | 0.894 | 14 | -- | -- | -- | -- |
| 327.48 | 0.843 | 5.45 | -- | -- | -2.76 | -- | -- | 1.65 | -- | 1.58 | 22732 | -- | -- |
| 584.19 | 1.13 | 5.63 | -- | -- | -- | -- | -- | 0.882 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 303.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 2 | 303.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 7 | 304.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 9 | 304.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 27 | 307.13 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 13 |
| 30 | 307.39 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 38 | 307.66 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 16 |
| 46 | 307.81 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 68 | 308.17 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 70 | 308.23 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 76 | 308.30 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 79 | 308.32 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 13 |
| 96 | 308.50 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 7 |
| 102 | 308.55 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 110 | 308.58 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 13 |
| 114 | 308.64 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 123 | 308.79 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 173 | 309.30 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 181 | 309.37 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 22 |
| 187 | 309.42 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 200 | 309.48 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 21 |
| 207 | 309.49 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 23 |
| 210 | 309.50 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 20 |
| 223 | 309.53 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 225 | 309.54 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 245 | 309.59 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 251 | 309.61 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 252 | 309.61 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 259 | 309.62 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 261 | 309.63 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 267 | 309.64 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 308 | 309.78 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 15 |
| 327 | 309.83 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 13 |
| 332 | 309.84 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 13 |
| 335 | 309.85 | temperature | 25.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 345 | 309.86 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 14 |
| 369 | 309.91 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 380 | 309.91 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 381 | 309.92 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 391 | 309.93 | temperature | 25.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 411 | 309.95 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 17 |
| 452 | 310.00 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 20 |
| 525 | 310.10 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 553 | 310.14 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 20 |
| 622 | 310.23 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 6 | 20 |
| 634 | 310.24 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 640 | 310.25 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 4 | 22 |
| 679 | 310.29 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 6 | 20 |
| 713 | 310.33 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 718 | 310.34 | temperature | 25.0 | 43200 | < th | dose independent | no | NA | NA |
| 740 | 310.35 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 754 | 310.36 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 858 | 310.48 | temperature | 25.0 | 43200 | > th | dose independent | no | NA | NA |
| 861 | 310.48 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 866 | 310.49 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 872 | 310.49 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 971 | 310.67 | temperature | 25.0 | 4320 | > th | dose independent | sin | 8 | NA |