Os11g0672600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0672600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.45 | 0.496 | 9.24 | -0.356 | 3.72 | -1.81 | 0.727 | 0.417 | -0.187 | 6.25 | 20.3 | 1528 | -- | -- |
| 111.75 | 0.492 | 9.25 | -0.422 | 3.72 | -1.87 | 0.736 | -- | -0.195 | 6.24 | 20.32 | 1494 | -- | -- |
| 112.74 | 0.495 | 9.24 | -0.342 | 3.72 | -1.82 | -- | 0.426 | -0.187 | 6.24 | 20.37 | 1516 | -- | -- |
| 113.02 | 0.495 | 9.26 | -0.416 | 3.73 | -1.88 | -- | -- | -0.202 | 6.23 | 20.35 | 1490 | -- | -- |
| 409.74 | 0.943 | 9.22 | -0.43 | -- | -2.77 | -- | 0.856 | 0.117 | -- | 26.4 | 396 | -- | -- |
| 182.58 | 0.633 | 9.35 | -1.19 | 3.69 | -- | 1.05 | -- | -0.604 | 6.27 | -- | -- | -- | -- |
| 185.3 | 0.637 | 9.35 | -1.18 | 3.7 | -- | -- | -- | -0.608 | 6.26 | -- | -- | -- | -- |
| 406.46 | 0.939 | 9.25 | -0.335 | -- | -2.81 | -- | -- | 0.218 | -- | 26.35 | 400 | -- | -- |
| 116.81 | 0.503 | 9.24 | -- | 3.72 | -2.06 | -- | -- | -0.121 | 6.23 | 20.39 | 1517 | -- | -- |
| 893.92 | 1.4 | 9.42 | -1.08 | -- | -- | -- | -- | -0.527 | -- | -- | -- | -- | -- |
| 222.09 | 0.697 | 9.32 | -- | 3.68 | -- | -- | -- | -0.476 | 6.28 | -- | -- | -- | -- |
| 409.34 | 0.942 | 9.24 | -- | -- | -2.85 | -- | -- | 0.264 | -- | 26.36 | 400 | -- | -- |
| 924.76 | 1.42 | 9.39 | -- | -- | -- | -- | -- | -0.407 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 3 | 103.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 35 | 104.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 37 | 104.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 41 | 104.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 51 | 104.67 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 52 | 104.67 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 104 | 105.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 125 | 106.14 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 126 | 106.15 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 144 | 106.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 155 | 106.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 5 |
| 157 | 106.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 188 | 106.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 226 | 107.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 269 | 107.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 286 | 107.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 358 | 108.52 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 574 | 110.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 791 | 111.45 | temperature | 15 | 1440 | > th | dose dependent | sin | 8 | NA |