Os11g0672300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0672300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.69 | 0.573 | 11.5 | -0.984 | 1.03 | -2.37 | 2.62 | 1.03 | 0.564 | 22.4 | 23.1 | 4 | -- | -- |
| 149.42 | 0.574 | 11.5 | -0.858 | 1.04 | -2.62 | 2.83 | -- | 0.602 | 22.5 | 22.62 | 5 | -- | -- |
| 171.46 | 0.615 | 11.6 | -1.28 | 1 | -2.14 | -- | 2.82 | 0.522 | 22.2 | 23.1 | 4 | -- | -- |
| 182.19 | 0.633 | 11.5 | -0.974 | 1.03 | -2.68 | -- | -- | 0.597 | 22.4 | 22.5 | 4 | -- | -- |
| 227.69 | 0.707 | 11.5 | -1.27 | -- | -1.43 | -- | 3.55 | 0.559 | -- | 23.62 | 4 | -- | -- |
| 229.66 | 0.71 | 11.4 | -0.358 | 0.758 | -- | 2.98 | -- | 0.911 | 21.9 | -- | -- | -- | -- |
| 263.09 | 0.76 | 11.4 | -0.468 | 0.769 | -- | -- | -- | 0.909 | 21.2 | -- | -- | -- | -- |
| 239.98 | 0.721 | 11.5 | -0.874 | -- | -2.42 | -- | -- | 0.689 | -- | 21.47 | 4 | -- | -- |
| 205.26 | 0.671 | 11.5 | -- | 0.983 | -2.28 | -- | -- | 0.743 | 22.2 | 22.5 | 4 | -- | -- |
| 297.42 | 0.806 | 11.4 | -0.465 | -- | -- | -- | -- | 0.906 | -- | -- | -- | -- | -- |
| 268.86 | 0.767 | 11.4 | -- | 0.769 | -- | -- | -- | 0.961 | 21.2 | -- | -- | -- | -- |
| 258.68 | 0.749 | 11.4 | -- | -- | -2.04 | -- | -- | 0.811 | -- | 21.5 | 4 | -- | -- |
| 303.13 | 0.813 | 11.4 | -- | -- | -- | -- | -- | 0.957 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.00 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 2 | 139.67 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 5 | 140.71 | temperature | 25 | 90 | < th | dose dependent | sin | 14 | NA |
| 13 | 141.36 | temperature | 25 | 10 | < th | dose dependent | sin | 13 | NA |
| 22 | 142.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 30 | 142.50 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 44 | 143.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 110 | 146.23 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 113 | 146.31 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 191 | 149.38 | temperature | 20 | 10 | < th | dose independent | sin | 12 | NA |
| 211 | 150.66 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 14 |
| 242 | 151.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 251 | 151.84 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 16 |
| 266 | 152.17 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 14 |
| 276 | 152.39 | temperature | 15 | 90 | > th | dose dependent | sin | 13 | NA |
| 278 | 152.42 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 12 |
| 282 | 152.45 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 18 |
| 283 | 152.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 304 | 152.85 | temperature | 20 | 30 | > th | dose independent | sin | 14 | NA |
| 320 | 153.04 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 20 |
| 351 | 153.49 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 357 | 153.57 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 362 | 153.64 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 22 |
| 369 | 153.71 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 385 | 153.87 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 390 | 153.91 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 393 | 153.93 | temperature | 15 | 270 | > th | dose dependent | sin | 15 | NA |
| 400 | 154.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 407 | 154.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 423 | 154.38 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 20 |
| 427 | 154.44 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 18 |
| 440 | 154.63 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 22 |
| 488 | 155.10 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 23 |
| 502 | 155.27 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 20 |
| 526 | 155.40 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 531 | 155.41 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 668 | 156.63 | temperature | 20 | 10 | < th | dose independent | rect. | 8 | 22 |
| 729 | 157.28 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 22 |
| 735 | 157.33 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 741 | 157.36 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 23 |
| 772 | 157.69 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 775 | 157.77 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 781 | 157.84 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 786 | 157.89 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 816 | 158.17 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 830 | 158.28 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 837 | 158.37 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 843 | 158.40 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 890 | 158.84 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 964 | 159.90 | temperature | 20 | 30 | > th | dose independent | rect. | 11 | 23 |
| 997 | 160.31 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 23 |