Os11g0660300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0660300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : WD40-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.65 | 0.174 | 10.2 | 1.22 | 0.377 | -0.759 | -0.0817 | -0.202 | 0.285 | 12.2 | 10.05 | 259 | -- | -- |
| 13.67 | 0.172 | 10.2 | 1.25 | 0.383 | -0.765 | -0.1 | -- | 0.293 | 12.2 | 9.43 | 245 | -- | -- |
| 13.67 | 0.172 | 10.2 | 1.2 | 0.387 | -0.764 | -- | -0.264 | 0.283 | 12.2 | 10.98 | 238 | -- | -- |
| 13.72 | 0.173 | 10.2 | 1.24 | 0.386 | -0.769 | -- | -- | 0.293 | 12.2 | 10.16 | 241 | -- | -- |
| 16.19 | 0.187 | 10.2 | 1.28 | -- | -0.843 | -- | -0.112 | 0.307 | -- | 12.82 | 784 | -- | -- |
| 19.84 | 0.209 | 10.2 | 1.08 | 0.352 | -- | -0.0996 | -- | 0.185 | 9.89 | -- | -- | -- | -- |
| 19.88 | 0.209 | 10.2 | 1.08 | 0.352 | -- | -- | -- | 0.185 | 9.87 | -- | -- | -- | -- |
| 15.85 | 0.185 | 10.2 | 1.26 | -- | -0.646 | -- | -- | 0.304 | -- | 21.24 | 798 | -- | -- |
| 50.27 | 0.332 | 10.3 | -- | 0.37 | -0.177 | -- | -- | 0.0854 | 10.1 | -2.652 | 29 | -- | -- |
| 27.31 | 0.244 | 10.3 | 1.08 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 50.6 | 0.333 | 10.3 | -- | 0.349 | -- | -- | -- | 0.0644 | 9.64 | -- | -- | -- | -- |
| 53.8 | 0.342 | 10.3 | -- | -- | -0.371 | -- | -- | 0.0882 | -- | 24.6 | 753 | -- | -- |
| 57.84 | 0.355 | 10.3 | -- | -- | -- | -- | -- | 0.0654 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 13.35 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 4 | 13.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 7 | 13.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 10 | 13.45 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 11 | 13.46 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 13 | 13.46 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 107 | 13.53 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 22 | NA |
| 193 | 13.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 230 | 13.58 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 257 | 13.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 259 | 13.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 273 | 13.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 362 | 13.65 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 436 | 13.68 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 473 | 13.70 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 520 | 13.72 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 589 | 13.75 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 595 | 13.75 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 906 | 13.81 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 912 | 13.81 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 986 | 13.83 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 991 | 13.83 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 3 |