Os11g0648400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0648400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.8 | 0.59 | 6.29 | 2.1 | 1.27 | 2.28 | 0.0981 | -6.46 | 1.49 | 5.97 | 26.7 | 5180 | -- | -- |
| 160.34 | 0.59 | 6.21 | 1.84 | 1.1 | 3 | 0.038 | -- | 1.21 | 6.02 | 19.7 | 21874 | -- | -- |
| 157.54 | 0.585 | 6.29 | 2.18 | 1.26 | 2.29 | -- | -6.3 | 1.49 | 6.02 | 27 | 5241 | -- | -- |
| 148.76 | 0.568 | 6.33 | 0.709 | 1.19 | 3.66 | -- | -- | 0.801 | 5.7 | 19 | 41914 | -- | -- |
| 231.7 | 0.709 | 6.26 | 2.38 | -- | 2.34 | -- | -6.05 | 1.66 | -- | 26.8 | 4247 | -- | -- |
| 281.18 | 0.786 | 6 | 4.58 | 1.16 | -- | 0.374 | -- | 2.21 | 5.43 | -- | -- | -- | -- |
| 281.53 | 0.786 | 6 | 4.58 | 1.17 | -- | -- | -- | 2.21 | 5.45 | -- | -- | -- | -- |
| 215.49 | 0.684 | 6.35 | 0.483 | -- | 3.84 | -- | -- | 0.811 | -- | 18.9 | 44483 | -- | -- |
| 149.08 | 0.569 | 6.34 | -- | 1.15 | 4.12 | -- | -- | 0.706 | 5.69 | 18.64 | 45740 | -- | -- |
| 352.48 | 0.877 | 6.01 | 4.62 | -- | -- | -- | -- | 2.24 | -- | -- | -- | -- | -- |
| 834.2 | 1.35 | 6.11 | -- | 1.24 | -- | -- | -- | 1.7 | 5.3 | -- | -- | -- | -- |
| 216.58 | 0.685 | 6.36 | -- | -- | 4.16 | -- | -- | 0.683 | -- | 18.63 | 45883 | -- | -- |
| 915.09 | 1.41 | 6.13 | -- | -- | -- | -- | -- | 1.72 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.72 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 2 | 145.13 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 145.56 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 5 | 145.69 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 7 | 145.71 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 15 | 145.76 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 28 | 145.93 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 29 | 145.93 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 30 | 145.93 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 37 | 146.07 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 40 | 146.13 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 41 | 146.13 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 42 | 146.13 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 43 | 146.14 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 49 | 146.20 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 55 | 146.23 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 56 | 146.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 61 | 146.27 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 84 | 146.42 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 21 |
| 103 | 146.49 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 112 | 146.50 | temperature | 20 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 113 | 146.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 117 | 146.51 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 161 | 146.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 164 | 146.62 | temperature | 20 | 43200 | < th | dose independent | sin | 13 | NA |
| 173 | 146.64 | radiation | 1 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 179 | 146.66 | temperature | 20 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 190 | 146.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 12 |
| 223 | 146.77 | temperature | 20 | 43200 | > th | dose independent | sin | 13 | NA |
| 248 | 146.81 | temperature | 20 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 284 | 146.88 | radiation | 1 | 43200 | > th | dose independent | sin | 7 | NA |
| 302 | 146.92 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 311 | 146.94 | radiation | 1 | 43200 | < th | dose independent | sin | 7 | NA |
| 340 | 146.98 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 396 | 147.09 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 436 | 147.14 | radiation | 1 | 43200 | < th | dose dependent | sin | 7 | NA |
| 616 | 147.34 | humidity | 90 | 43200 | > th | dose dependent | rect. | 6 | 19 |
| 665 | 147.39 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 709 | 147.47 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 745 | 147.52 | temperature | 25 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 760 | 147.53 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 14 |
| 854 | 147.64 | temperature | 25 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 866 | 147.65 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 16 |
| 898 | 147.67 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 931 | 147.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 23 |