Os11g0644800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aminotransferase, class I and II domain containing protein.
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Os11g0644800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aminotransferase, class I and II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.21 | 0.759 | 11.7 | -1.2 | 5.72 | 3.84 | 1.67 | 1.24 | -1.05 | 8.52 | 24.77 | 243 | 11.1 | -- |
| 261.89 | 0.754 | 11.6 | -1.08 | 5.73 | 3.69 | 1.22 | -- | -1.02 | 8.53 | 24.9 | 225 | 10.8 | -- |
| 268.38 | 0.763 | 11.6 | -1.08 | 5.73 | 3.88 | -- | 0.504 | -0.977 | 8.55 | 25.06 | 249 | 11.1 | -- |
| 266.71 | 0.761 | 11.6 | -1.05 | 5.74 | 3.74 | -- | -- | -1.01 | 8.55 | 24.94 | 207 | 10.5 | -- |
| 439.5 | 0.976 | 11.9 | -1.55 | -- | 5.77 | -- | 5.86 | -1.42 | -- | 47.82 | 391 | 0.752 | -- |
| 372.44 | 0.905 | 11.7 | -1.64 | 5.25 | -- | 2 | -- | -1.43 | 8.19 | -- | -- | -- | -- |
| 384.65 | 0.918 | 11.7 | -1.58 | 5.25 | -- | -- | -- | -1.44 | 8.17 | -- | -- | -- | -- |
| 381.71 | 0.91 | 11.9 | -1.44 | -- | 5.62 | -- | -- | -1.32 | -- | 90.9 | 335 | 0.55 | -- |
| 293.34 | 0.798 | 11.6 | -- | 5.8 | 4.21 | -- | -- | -0.859 | 8.57 | 24.8 | 216 | 11 | -- |
| 1901.86 | 2.04 | 11.9 | -1.54 | -- | -- | -- | -- | -1.38 | -- | -- | -- | -- | -- |
| 450.61 | 0.993 | 11.7 | -- | 5.24 | -- | -- | -- | -1.26 | 8.2 | -- | -- | -- | -- |
| 370.09 | 0.896 | 11.8 | -- | -- | 6.65 | -- | -- | -1.05 | -- | 135.4 | 1224 | 8.18 | -- |
| 1964.45 | 2.07 | 11.8 | -- | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 262.12 | temperature | 25 | 270 | < th | dose dependent | sin | 17 | NA |
| 2 | 262.19 | temperature | 25 | 90 | < th | dose dependent | sin | 15 | NA |
| 5 | 263.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 15 |
| 7 | 264.02 | temperature | 25 | 10 | < th | dose dependent | sin | 14 | NA |
| 15 | 265.22 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 16 | 265.29 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 12 |
| 67 | 271.68 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 9 |
| 85 | 273.24 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 94 | 273.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 106 | 274.44 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 208 | 278.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 209 | 278.38 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 11 |
| 223 | 279.55 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 10 |
| 236 | 279.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 242 | 280.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 261 | 280.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 290 | 281.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 312 | 281.56 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 323 | 281.73 | temperature | 15 | 90 | > th | dose dependent | sin | 12 | NA |
| 339 | 282.00 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 340 | 282.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 348 | 282.18 | temperature | 20 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 355 | 282.27 | temperature | 20 | 90 | > th | dose independent | sin | 15 | NA |
| 370 | 282.51 | temperature | 20 | 90 | < th | dose independent | sin | 15 | NA |
| 384 | 282.67 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 390 | 282.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 459 | 283.82 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 10 |
| 464 | 283.85 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 12 |
| 524 | 284.64 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 15 |
| 618 | 285.59 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 16 |
| 649 | 285.96 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 663 | 286.16 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 835 | 287.57 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 18 |
| 850 | 287.70 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 12 |
| 881 | 287.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 900 | 288.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 942 | 288.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 976 | 288.56 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 14 |
| 990 | 288.62 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 18 |