Os11g0644600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0644600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.99 | 0.458 | 13.9 | -1.01 | 3.52 | 2.02 | 2.61 | 0.522 | -0.661 | 8.06 | 0.09097 | 75 | 9.58 | -- |
| 95.66 | 0.456 | 14 | -0.981 | 3.5 | 1.99 | 2.35 | -- | -0.679 | 8.05 | 0.06007 | 69 | 9.39 | -- |
| 103.27 | 0.473 | 13.9 | -0.872 | 3.72 | 2.16 | -- | -1.14 | -0.675 | 7.96 | 0.0003306 | 69 | 10.1 | -- |
| 108.9 | 0.486 | 13.9 | -0.888 | 3.69 | 2.19 | -- | -- | -0.66 | 8.14 | 0.05999 | 69 | 9.63 | -- |
| 138.41 | 0.548 | 14 | -1.05 | -- | 3.06 | -- | 2.93 | -0.738 | -- | 0.01257 | 788 | 6.77 | -- |
| 151.62 | 0.577 | 14 | -1.1 | 2.55 | -- | 2.71 | -- | -0.717 | 6.06 | -- | -- | -- | -- |
| 169.38 | 0.609 | 14 | -1.07 | 2.56 | -- | -- | -- | -0.728 | 5.96 | -- | -- | -- | -- |
| 156.03 | 0.582 | 14 | -1 | -- | 3.18 | -- | -- | -0.671 | -- | 0.3001 | 805 | 7.42 | -- |
| 130.33 | 0.532 | 13.9 | -- | 3.68 | 2.21 | -- | -- | -0.595 | 8.16 | 0.0586 | 68 | 9.7 | -- |
| 509.85 | 1.06 | 14 | -0.998 | -- | -- | -- | -- | -0.669 | -- | -- | -- | -- | -- |
| 199.76 | 0.661 | 14 | -- | 2.55 | -- | -- | -- | -0.608 | 5.98 | -- | -- | -- | -- |
| 173.21 | 0.613 | 14 | -- | -- | 3.49 | -- | -- | -0.545 | -- | 0.002368 | 891 | 9.37 | -- |
| 536.12 | 1.08 | 14 | -- | -- | -- | -- | -- | -0.558 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.50 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 3 | 87.50 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 4 | 88.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 19 |
| 5 | 88.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 7 | 89.13 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 8 | 89.14 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 15 | 89.74 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 20 | 90.39 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 22 | 90.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 23 | 90.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 26 | 90.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 29 | 90.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 5 |
| 30 | 90.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 32 | 91.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 33 | 91.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 50 | 92.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 55 | 92.89 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 78 | 93.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 84 | 93.85 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 85 | 93.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 97 | 94.38 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 100 | 94.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 108 | 94.68 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 117 | 94.84 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 122 | 94.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 130 | 95.24 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 136 | 95.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 168 | 95.76 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 169 | 95.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 170 | 95.77 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 173 | 95.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 17 |
| 182 | 96.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 7 |
| 183 | 96.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 184 | 96.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 195 | 96.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 199 | 96.29 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 218 | 96.56 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 5 |
| 233 | 96.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 236 | 96.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 5 |
| 237 | 96.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 5 |
| 262 | 97.11 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 264 | 97.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 9 |
| 265 | 97.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 267 | 97.18 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 16 | 9 |
| 273 | 97.25 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 274 | 97.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 15 |
| 282 | 97.38 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 288 | 97.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 16 |
| 289 | 97.48 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 296 | 97.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 1 |
| 298 | 97.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 300 | 97.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 302 | 97.65 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 304 | 97.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 23 |
| 314 | 97.80 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 315 | 97.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 316 | 97.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 317 | 97.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 318 | 97.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 323 | 97.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 17 |
| 324 | 97.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 328 | 97.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 336 | 98.05 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 376 | 98.38 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 14 | 5 |
| 379 | 98.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 388 | 98.60 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 406 | 98.80 | radiation | 1.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 430 | 98.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 440 | 99.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 17 |
| 451 | 99.26 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 497 | 99.41 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 530 | 99.71 | radiation | 1.0 | 270 | < th | dose independent | sin | 18 | NA |
| 539 | 99.74 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 550 | 99.76 | radiation | 1.0 | 270 | > th | dose independent | sin | 18 | NA |
| 573 | 100.06 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 15 |
| 613 | 100.26 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 5 |
| 614 | 100.26 | radiation | 1.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 621 | 100.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 641 | 100.42 | radiation | 40.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 651 | 100.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 652 | 100.52 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 658 | 100.56 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 687 | 100.77 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 692 | 100.77 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 19 |
| 706 | 100.86 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 730 | 101.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 738 | 101.14 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 7 |
| 768 | 101.43 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 22 | 10 |
| 774 | 101.51 | radiation | 1.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 855 | 101.83 | radiation | 1.0 | 90 | > th | dose independent | sin | 15 | NA |
| 904 | 102.07 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 908 | 102.10 | radiation | 1.0 | 90 | < th | dose independent | sin | 15 | NA |
| 913 | 102.15 | wind | 1.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 936 | 102.36 | radiation | 40.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 937 | 102.37 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 15 |
| 947 | 102.40 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 963 | 102.46 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 4 |
| 980 | 102.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 984 | 102.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 985 | 102.58 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 999 | 102.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 1000 | 102.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 9 |