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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0643100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Transferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.84 (0.0295) R2 : 0.00017
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0173 (0.0622) R2dN8 : 0.000219 R2N8 : 0.00017
σ : 0.556
deviance : 141.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
133.78 0.539 2.83 0.0852 0.0756 0.807 -0.128 2.83 -0.00243 1.84 1015 10 -- --
135.62 0.542 2.83 0.0907 0.0717 1.34 -0.0945 -- 0.032 1.83 1016 11 -- --
133.83 0.543 2.83 0.0911 0.0756 0.861 -- 2.91 -0.0014 1.22 1015 13 -- --
135.39 0.542 2.83 0.0983 0.069 1.58 -- -- 0.0124 1.34 1016 11 -- --
134.18 0.542 2.83 0.094 -- 0.89 -- 2.88 0.000567 -- 1015 15 -- --
140.84 0.556 2.83 0.128 0.102 -- 0.12 -- -0.00428 0.376 -- -- -- --
140.9 0.556 2.83 0.123 0.102 -- -- -- -0.00512 0.825 -- -- -- --
135.66 0.542 2.83 0.102 -- 1.59 -- -- 0.00593 -- 1016 11 -- --
135.66 0.542 2.83 -- 0.0775 1.57 -- -- 0.000331 1.34 1016 11 -- --
141.55 0.556 2.83 0.127 -- -- -- -- -0.00323 -- -- -- -- --
141.3 0.556 2.84 -- 0.104 -- -- -- -0.0188 0.878 -- -- -- --
135.94 0.543 2.83 -- -- 1.6 -- -- -0.00397 -- 1016 11 -- --
141.97 0.556 2.84 -- -- -- -- -- -0.0173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 127.50 temperature 20.0 90 < th dose dependent rect. 18 3
3 128.62 wind 7.0 30 > th dose independent rect. 17 1
4 128.81 temperature 20.0 90 < th dose dependent rect. 18 5
20 129.64 temperature 20.0 90 < th dose dependent sin 21 NA
43 131.01 humidity 90.0 90 > th dose dependent rect. 18 1
47 131.10 humidity 90.0 90 > th dose independent rect. 18 1
48 131.13 temperature 20.0 10 < th dose independent rect. 19 1
52 131.14 temperature 20.0 10 < th dose dependent rect. 20 1
91 131.57 wind 1.0 90 < th dose dependent rect. 20 1
98 131.62 wind 7.0 30 > th dose dependent rect. 17 1
122 131.90 wind 1.0 30 < th dose independent rect. 5 3
130 132.09 temperature 20.0 720 < th dose independent rect. 14 3
140 132.11 temperature 20.0 720 < th dose independent rect. 15 1
154 132.17 atmosphere 1005.0 30 > th dose dependent rect. 17 1
165 132.25 temperature 20.0 720 < th dose dependent rect. 14 1
173 132.30 temperature 25.0 10 < th dose dependent rect. 11 13
232 132.62 temperature 20.0 90 < th dose independent rect. 18 5
273 132.73 atmosphere 1015.0 10 < th dose independent rect. 23 23
276 132.76 precipitation 0.1 10 > th dose independent rect. 22 4
278 132.76 precipitation 0.1 10 > th dose dependent rect. 22 4
286 132.82 precipitation 0.1 90 > th dose independent rect. 1 2
287 132.82 precipitation 0.1 90 > th dose dependent rect. 1 2
291 132.83 wind 1.0 90 < th dose dependent rect. 16 5
292 132.84 precipitation 0.1 10 > th dose independent rect. 1 1
302 132.84 precipitation 0.1 10 > th dose dependent rect. 1 1
328 132.91 atmosphere 1015.0 10 < th dose independent rect. 13 23
343 132.96 atmosphere 1015.0 720 < th dose independent rect. 7 18
349 133.00 temperature 15.0 1440 > th dose independent rect. 2 4
355 133.00 wind 1.0 30 < th dose dependent rect. 5 3
370 133.05 atmosphere 1015.0 270 < th dose independent rect. 21 23
373 133.06 atmosphere 1015.0 720 < th dose independent rect. 12 23
384 133.11 wind 1.0 30 < th dose dependent rect. 5 1
388 133.12 atmosphere 1015.0 720 < th dose independent rect. 17 8
421 133.21 atmosphere 1015.0 720 < th dose independent rect. 13 16
423 133.22 atmosphere 1015.0 270 < th dose independent rect. 13 13
427 133.24 wind 3.0 10 < th dose independent rect. 20 1
463 133.37 atmosphere 1015.0 720 < th dose independent rect. 15 10
507 133.48 wind 3.0 14400 < th dose independent rect. 22 1
508 133.48 humidity 90.0 30 > th dose dependent rect. 15 5
526 133.56 atmosphere 1015.0 720 < th dose independent rect. 21 14
527 133.56 atmosphere 1015.0 720 < th dose independent rect. 17 16
530 133.57 atmosphere 1015.0 720 < th dose independent rect. 21 8
538 133.61 wind 1.0 30 < th dose independent rect. 5 1
539 133.61 humidity 50.0 1440 < th dose dependent rect. 13 1
547 133.69 temperature 20.0 90 < th dose independent rect. 12 11
555 133.72 wind 3.0 14400 > th dose independent rect. 22 1
559 133.73 atmosphere 1015.0 10 < th dose independent sin 9 NA
565 133.73 atmosphere 1015.0 10 < th dose independent sin 21 NA
587 133.75 humidity 90.0 720 > th dose dependent rect. 17 3
598 133.76 atmosphere 1015.0 720 > th dose dependent rect. 3 19
603 133.77 humidity 50.0 1440 < th dose independent rect. 9 1
636 133.77 atmosphere 1015.0 720 > th dose dependent sin 22 NA
638 133.77 humidity 50.0 1440 < th dose dependent rect. 9 1
674 133.78 atmosphere 1015.0 10 > th dose independent sin 7 NA
770 133.78 atmosphere 1015.0 10 > th dose independent no NA NA
778 133.78 atmosphere 1015.0 10 < th dose independent no NA NA
782 133.78 atmosphere 1015.0 270 > th dose independent rect. 20 1
788 133.78 atmosphere 1015.0 10 > th dose independent rect. 23 1