BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0643100 Os11g0643100|AK061327
(448 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48930.1 | chr5:19836654-19838092 REVERSE LENGTH=434 95 7e-20
AT5G63560.1 | chr5:25449517-25451234 FORWARD LENGTH=427 79 6e-15
AT2G19070.1 | chr2:8260185-8261958 REVERSE LENGTH=452 65 9e-11
AT1G03390.1 | chr1:841033-842418 REVERSE LENGTH=462 63 3e-10
AT3G48720.1 | chr3:18046527-18049295 FORWARD LENGTH=431 60 2e-09
AT5G41040.1 | chr5:16431448-16433086 FORWARD LENGTH=458 59 6e-09
AT5G23940.1 | chr5:8076616-8079677 REVERSE LENGTH=485 59 7e-09
AT1G27620.1 | chr1:9608444-9610432 FORWARD LENGTH=443 50 2e-06
>AT5G48930.1 | chr5:19836654-19838092 REVERSE LENGTH=434
Length = 433
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 168/460 (36%), Gaps = 50/460 (10%)
Query: 1 MEITSSAMLKPAPTPTPHPLAGEKVPLTAFDRAAFDVFVPM-----VFAYRAPAPSS--- 52
+ I S M++PA + P+T + D+ +P V+ YR S+
Sbjct: 3 INIRDSTMVRPA----------TETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFD 52
Query: 53 -EAVKEGLRMAVAAYPLAAGRLAVDVAADGQGXXXXXXVLHVNDEGXXXXXXXXXXXXXX 111
+ +KE L A+ + AGRL D DG+ + N G
Sbjct: 53 PQVMKEALSKALVPFYPMAGRLKRD--DDGR------IEIDCNGAGVLFVVADTPSVIDD 104
Query: 112 XXXXXXXXXXYPAPPE-------HSFGAAVLQVQLTRFRCSXXXXXXXXXXXXFDGHSTS 164
PE HSF VLQV T F+C DG S
Sbjct: 105 FGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQV--TFFKCGGASLGVGMQHHAADGFSGL 162
Query: 165 AFCTTWARAVRDGEAFSVPSPCLDRAITSVPRSPPAPVFDHRSIEFKVGNKXXXXXXXXX 224
F TW+ R G ++P P +DR + R PP P F H +E++
Sbjct: 163 HFINTWSDMAR-GLDLTIP-PFIDRTLLRA-RDPPQPAFHH--VEYQPAPSMKIPLDPSK 217
Query: 225 XXVEKITNIGVRFTAKFVAELKARVGGRCST-----FECVLAHAWKKMTAARGLKPEEFT 279
E T + T + LKA+ +T +E + H W+ + ARGL ++ T
Sbjct: 218 SGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQET 277
Query: 280 XXXXXXXXXXXXXPPAPADLFGNMVLWAFPRLQVRRLLSASYXXXXXXXXXXXXXXXXEY 339
P P FGN++ A P LLS Y
Sbjct: 278 KLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNY 337
Query: 340 IQSFVDYVEVADARGEELAATAAEPGETLCPDLEVDSWLGFRFHEMDLGTGPPAAVLSPD 399
++S +DY+E+ +L+A CP+L + SW+ ++ D G G P +
Sbjct: 338 LRSALDYLEMQ----PDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGG 393
Query: 400 LPIEGLMILVPXXXXXXXXXLFVALADDRAQVFEQICYSL 439
+P EGL ++P + +AL + ++FE+ + +
Sbjct: 394 IPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFEI 433
>AT5G63560.1 | chr5:25449517-25451234 FORWARD LENGTH=427
Length = 426
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 135/399 (33%), Gaps = 36/399 (9%)
Query: 46 RAPAPSSEAVKEGLRMAVAAYPLAAGRLAVD----VAADGQGXXXXXXVLHVNDEGXXXX 101
R+ S E +K+ L + Y AAGRL + +A D G V+ V E
Sbjct: 52 RSNEESYEVIKKSLSEVLVHYYPAAGRLTISPEGKIAVDCTGEG----VVVVEAEANCGI 107
Query: 102 XXXXXXXXXXXXXXXXXXXXYPAPPEHSFGAAVLQ-----VQLTRFRCSXXXXXXXXXXX 156
Y P + +L+ VQ+T F+C
Sbjct: 108 EKIKKAISEIDQPETLEKLVYDVPGARN----ILEIPPVVVQVTNFKCGGFVLGLGMNHN 163
Query: 157 XFDGHSTSAFCTTWARAVRDGEAFSVPSPCLDRAITSVPRSPPAPVFDHRSIEFKVGNKX 216
FDG + F +WA R G SVP P LDR + PR+PP F H E +
Sbjct: 164 MFDGIAAMEFLNSWAETAR-GLPLSVP-PFLDRTLLR-PRTPPKIEFPHNEFE----DLE 216
Query: 217 XXXXXXXXXXVEKITNIGVRFTAKFVAELKARVGGRCSTFECVLAHAWKKMTAARGLKPE 276
EK+ F + + LK R +TF+ + W+ A GLKP+
Sbjct: 217 DISGTGKLYSDEKLVYKSFLFGPEKLERLKIMAETRSTTFQTLTGFLWRARCQALGLKPD 276
Query: 277 EFTXXXXXXXXXXXXXPPAPADLFGNMVLWAFPRLQVRRLLSASYXXXXXXXXXXXXXXX 336
+ P P GN +++ + +
Sbjct: 277 QRIKLLFAADGRSRFVPELPKGYSGNGIVFTYCVTTAGEVTLNPLSHSVCLVKRAVEMVN 336
Query: 337 XEYIQSFVDYVEVADARGEELAATAAEPGETLCPDLEVDSWLGFRFHEMDLGTGPPAAVL 396
+++S +DY EV AR +L L + SW FH D G G P
Sbjct: 337 DGFMRSAIDYFEVTRAR------------PSLTATLLITSWAKLSFHTKDFGWGEPVVSG 384
Query: 397 SPDLPIEGLMILVPXXXXXXXXXLFVALADDRAQVFEQI 435
LP + +++ +P + + L +VF+ I
Sbjct: 385 PVGLPEKEVILFLPCGSDTKSINVLLGLPGSAMKVFQGI 423
>AT2G19070.1 | chr2:8260185-8261958 REVERSE LENGTH=452
Length = 451
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 134/403 (33%), Gaps = 49/403 (12%)
Query: 19 PLAGEKVPLTAFDRAAFDVFVPMVFAYRAPAPS-----SEAVKEGL-RMAVAAYPLAA-- 70
P + PL +D+ +P ++ Y P+ S E +K L R+ V YP+A
Sbjct: 17 PTWSGRFPLAEWDQVGTITHIPTLYFYDKPSESFQGNVVEILKTSLSRVLVHFYPMAGRL 76
Query: 71 -----GRLAVDVAADGQGXXXXXXVLHVNDEGXXXXXXXXXXXXXXXXXXXXXXXXYPAP 125
GR ++ A+G V + E Y P
Sbjct: 77 RWLPRGRFELNCNAEG--------VEFIEAESEGKLSDFKDFSPTPEFENLMPQVNYKNP 128
Query: 126 PEHSFGAAVLQVQLTRFRCSXXXXXXXXXXXXFDGHSTSAFCTTWARAVRDGEAFSVPSP 185
E + Q+T+F+C DG S + W R R GE P
Sbjct: 129 IE---TIPLFLAQVTKFKCGGISLSVNVSHAIVDGQSALHLISEWGRLAR-GEPLET-VP 183
Query: 186 CLDRAITSVPRSPPA----PVFDHRSIE---FKVGNKXXXXXXXXXXXVEKITNIGVRFT 238
LDR I P P FDH+ + F +G +K + + +
Sbjct: 184 FLDRKILWAGEPLPPFVSPPKFDHKEFDQPPFLIGETDNVEERK-----KKTIVVMLPLS 238
Query: 239 AKFVAELKARVGGRCST--------FECVLAHAWKKMTAARGLKPEEFTXXXXXXXXXXX 290
+ +L+++ G + +E V H W+ ARG PE+ T
Sbjct: 239 TSQLQKLRSKANGSKHSDPAKGFTRYETVTGHVWRCACKARGHSPEQPTALGICIDTRSR 298
Query: 291 XXPPAPADLFGNMVLWAFPRLQVRRLLSASYXXXXXXXXXXXXXXXXEYIQSFVDYVEVA 350
PP P FGN L L+S EY+ ++Y++
Sbjct: 299 MEPPLPRGYFGNATLDVVAASTSGELISNELGFAASLISKAIKNVTNEYVMIGIEYLKNQ 358
Query: 351 D--ARGEELAATAAEPGETL-CPDLEVDSWLGFRFHEMDLGTG 390
+ ++L A + G P+L V SWL + +D G G
Sbjct: 359 KDLKKFQDLHALGSTEGPFYGNPNLGVVSWLTLPMYGLDFGWG 401
>AT1G03390.1 | chr1:841033-842418 REVERSE LENGTH=462
Length = 461
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 98/286 (34%), Gaps = 25/286 (8%)
Query: 134 VLQVQLTRFRCSXXXXXXXXXXXXFDGHSTSAFCTTWARAVRDGEAFSVPSPCLDRAITS 193
+L Q+T F C DG F +WA + G+ + P P DR T
Sbjct: 156 LLIAQVTFFTCGGFSLGIRLCHCICDGFGAMQFLGSWAATAKTGKLIADPEPVWDRE-TF 214
Query: 194 VPRSPPAPVFDHRSIEFKVGNKXXXXXXXXXXXVEKITNIGVRFTAKFVAELKARVGGR- 252
PR+PP + H ++K R + +F +K+ G
Sbjct: 215 KPRNPPMVKYPHHEYLPIEERSNLTNSLWDTKPLQKC----YRISKEFQCRVKSIAQGED 270
Query: 253 ----CSTFECVLAHAWKKMTAARGLKPEEFTXXXXXXXXXXXXXPPAP--ADLFGNMVLW 306
CSTF+ + AH W+ A +KP ++ +GN+V
Sbjct: 271 PTLVCSTFDAMAAHIWRSWVKALDVKPLDYNLRLTFSVNVRTRLETLKLRKGFYGNVVCL 330
Query: 307 AFPRLQVRRLLSASYXXXXXXXXXXXXXXXXEYIQSFVDYVEVADARGEELAATAAEPGE 366
A V L++ S +Y++S VDYV+V + E
Sbjct: 331 ACAMSSVESLINDSLSKTTRLVQDARLRVSEDYLRSMVDYVDVKRPKRLEFGG------- 383
Query: 367 TLCPDLEVDSWLGFRFHEM-DLGTGPPAAVLSPDL-PIEGLMILVP 410
L + W F +E D G G P DL P + +L+P
Sbjct: 384 ----KLTITQWTRFEMYETADFGWGKPVYAGPIDLRPTPQVCVLLP 425
>AT3G48720.1 | chr3:18046527-18049295 FORWARD LENGTH=431
Length = 430
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 102/304 (33%), Gaps = 24/304 (7%)
Query: 137 VQLTRFRCSXXXXXXXXXXXXFDGHSTSAFCTTWARAVRDGEAFSVPSPCLDRAITSVPR 196
VQ+T F+C FDG + + F +W + G SVP P LDR I R
Sbjct: 143 VQVTNFKCGGFVLGLGMSHNMFDGVAAAEFLNSWCEMAK-GLPLSVP-PFLDRTILR-SR 199
Query: 197 SPPAPVFDHRSIEFKVGNKXXXXXXXXXXXVEKITNIGVRFTAKFVAELK-----ARVGG 251
+PP F H + EK+ F + + +LK
Sbjct: 200 NPPKIEFPHNEFD----EIEDISDTGKIYDEEKLIYKSFLFEPEKLEKLKIMAIEENNNN 255
Query: 252 RCSTFECVLAHAWKKMTAARGLKPEEFTXXXXXXXXXXXXXPPAPADLFGNMVLWAFPRL 311
+ STF+ + WK A KP++ P P GN ++
Sbjct: 256 KVSTFQALTGFLWKSRCEALRFKPDQRVKLLFAADGRSRFIPRLPQGYCGNGIVLTGLVT 315
Query: 312 QVRRLLSASYXXXXXXXXXXXXXXXXEYIQSFVDYVEVADARGEELAATAAEPGETLCPD 371
L+ +++S +DY EV R ++
Sbjct: 316 SSGELVGNPLSHSVGLVKRLVELVTDGFMRSAMDYFEVNRTR------------PSMNAT 363
Query: 372 LEVDSWLGFRFHEMDLGTGPPAAVLSPDLPIEGLMILVPXXXXXXXXXLFVALADDRAQV 431
L + SW H++D G G P LP +++ +P +F+ L +V
Sbjct: 364 LLITSWSKLTLHKLDFGWGEPVFSGPVGLPGREVILFLPSGDDMKSINVFLGLPTSAMEV 423
Query: 432 FEQI 435
FE++
Sbjct: 424 FEEL 427
>AT5G41040.1 | chr5:16431448-16433086 FORWARD LENGTH=458
Length = 457
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 93/264 (35%), Gaps = 29/264 (10%)
Query: 138 QLTRFRCSXXXXXXXXXXXXFDGHSTSAFCTTWARAVRDGEAFSVPSPCLDRAITSVPRS 197
Q+T+F+C FDG F +W + R G + P P DR I + R+
Sbjct: 167 QVTKFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGQVAR-GLPLTTP-PFSDRTILNA-RN 223
Query: 198 PPAPVFDHRSIEFKVGNKXXXXXXXXXXXV---------EKITNIGVRFTAKFVAELKAR 248
PP H+ E ++ +K EKI + ++ T ++
Sbjct: 224 PPKIENLHQEFE-EIEDKSNINSLYTKEPTLYRSFCFDPEKIKKLKLQATENS----ESL 278
Query: 249 VGGRCSTFECVLAHAWKKMTAARGLKPEEFTXXXXXXXXXXXXXPPAPADLFGNMVLWAF 308
+G C++FE + A W+ T + + ++ T P P FGN ++
Sbjct: 279 LGNSCTSFEALSAFVWRARTKSLKMLSDQKTKLLFAVDGRAKFEPQLPKGYFGNGIVLTN 338
Query: 309 PRLQVRRLLSASYXXXXXXXXXXXXXXXXEYIQSFVDYVEVADARGEELAATAAEPGETL 368
+ L+ Y++S +DY EV AR +L
Sbjct: 339 SICEAGELIEKPLSFAVGLVREAIKMVTDGYMRSAIDYFEVTRAR------------PSL 386
Query: 369 CPDLEVDSWLGFRFHEMDLGTGPP 392
L + +W FH D G G P
Sbjct: 387 SSTLLITTWSRLGFHTTDFGWGEP 410
>AT5G23940.1 | chr5:8076616-8079677 REVERSE LENGTH=485
Length = 484
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 71/183 (38%), Gaps = 14/183 (7%)
Query: 134 VLQVQLTRFRCSXXXXXXXXXXXXFDGHSTSAFCTTWARAVRDGEAFSVPSPCLDRAITS 193
+L VQ+T+ + DG ST F ++WA R ++ S P LDR+
Sbjct: 148 LLAVQVTKLK-DGLAMGLAFNHAVLDGTSTWHFMSSWAEICRGAQSIST-QPFLDRSKAR 205
Query: 194 VPRSPPAPVFDHRSIEFKVGNKXXXXXXXXXXXVEKITNIGVRFTAKFVAELKARVGGRC 253
R E G VEKI RF+ V +K+R
Sbjct: 206 DTRVKLDLTAPKDPNETSNGEDAANPTVEPPQLVEKI----FRFSDFAVHTIKSRANSVI 261
Query: 254 --------STFECVLAHAWKKMTAARGLKPEEFTXXXXXXXXXXXXXPPAPADLFGNMVL 305
STF+ + +H W+ +T ARGLKPE+ T PP P + FGN++
Sbjct: 262 PSDSSKPFSTFQSLTSHIWRHVTLARGLKPEDITIFTVFADCRRRVDPPMPEEYFGNLIQ 321
Query: 306 WAF 308
F
Sbjct: 322 AIF 324
>AT1G27620.1 | chr1:9608444-9610432 FORWARD LENGTH=443
Length = 442
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 84/261 (32%), Gaps = 17/261 (6%)
Query: 135 LQVQLTRFRCSXXXXXXXXXXXXFDGHSTSAFCTTWARAVRDGEAFSVPSPCLDRAITSV 194
L +Q+T RC DG TS F WA A +A P R +
Sbjct: 137 LVIQVTYLRCGGMILCTAINHCLCDGIGTSQFLHAWAHATT-SQAHLPTRPFHSRHVLD- 194
Query: 195 PRSPPAPVFDHRSIEFKVG-NKXXXXXXXXXXXVEKITNIGVRFTAKFVAELKARV--GG 251
PR+PP H +K + + + F + LK
Sbjct: 195 PRNPPRVTHSHPGFTRTTTVDKSSTFDISKYLQSQPLAPATLTFNQSHLLRLKKTCAPSL 254
Query: 252 RCSTFECVLAHAWKKMTAARGLKPEEFTXXXXXXXXXXXXXPPAPADLFGNMVLWAFPRL 311
+C+TFE + A+ W+ + L P P +GN + A
Sbjct: 255 KCTTFEALAANTWRSWAQSLDLPMTMLVKLLFSVNMRKRLTPELPQGYYGNGFVLACAES 314
Query: 312 QVRRLLSASYXXXXXXXXXXXXXXXXEYIQSFVDYVEVADARGEELAATAAEPGETLCPD 371
+V+ L++ + EY++S +D +E + + +
Sbjct: 315 KVQDLVNGNIYHAVKSIQEAKSRITDEYVRSTIDLLEDKTVKTDVSCS------------ 362
Query: 372 LEVDSWLGFRFHEMDLGTGPP 392
L + W E+DLG G P
Sbjct: 363 LVISQWAKLGLEELDLGGGKP 383
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,538,481
Number of extensions: 248991
Number of successful extensions: 578
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 572
Number of HSP's successfully gapped: 8
Length of query: 448
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 346
Effective length of database: 8,310,137
Effective search space: 2875307402
Effective search space used: 2875307402
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)