Os11g0641300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0641300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.02 | 0.583 | 9.08 | -1.12 | 0.101 | 1.28 | 0.656 | -6.75 | -0.513 | 18.9 | 25.75 | 1188 | -- | -- |
| 162.47 | 0.594 | 8.93 | 0.2 | 0.126 | 0.823 | 0.526 | -- | -0.393 | 18.2 | 19.41 | 9564 | -- | -- |
| 155.05 | 0.58 | 9.08 | -1.12 | 0.113 | 1.29 | -- | -6.79 | -0.504 | 17.7 | 25.87 | 1189 | -- | -- |
| 162.62 | 0.594 | 8.94 | 0.249 | 0.163 | 0.744 | -- | -- | -0.387 | 19.9 | 20.2 | 8452 | -- | -- |
| 155.63 | 0.581 | 9.07 | -1.12 | -- | 1.29 | -- | -6.86 | -0.496 | -- | 25.93 | 1182 | -- | -- |
| 179.34 | 0.628 | 8.87 | 0.671 | 0.175 | -- | 0.355 | -- | -0.0935 | 20.5 | -- | -- | -- | -- |
| 179.67 | 0.628 | 8.87 | 0.658 | 0.175 | -- | -- | -- | -0.0944 | 21.3 | -- | -- | -- | -- |
| 163.83 | 0.596 | 8.93 | 0.24 | -- | 0.777 | -- | -- | -0.378 | -- | 19.9 | 8054 | -- | -- |
| 163.62 | 0.596 | 8.95 | -- | 0.141 | 0.908 | -- | -- | -0.448 | 20.4 | 18.8 | 9409 | -- | -- |
| 181.45 | 0.629 | 8.87 | 0.659 | -- | -- | -- | -- | -0.0951 | -- | -- | -- | -- | -- |
| 191.09 | 0.647 | 8.89 | -- | 0.175 | -- | -- | -- | -0.168 | 21.6 | -- | -- | -- | -- |
| 164.7 | 0.598 | 8.95 | -- | -- | 0.915 | -- | -- | -0.454 | -- | 18.9 | 9409 | -- | -- |
| 192.91 | 0.648 | 8.88 | -- | -- | -- | -- | -- | -0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.49 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 2 | 149.02 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 3 | 149.26 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 4 | 149.33 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 5 | 149.39 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 6 | 149.43 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 7 | 149.49 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 18 | 149.57 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 19 | 149.57 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 24 | 149.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 48 | 149.81 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 50 | 149.83 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 55 | 149.85 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 63 | 149.91 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 89 | 150.13 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 100 | 150.22 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 101 | 150.22 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 2 | 7 |
| 110 | 150.25 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 117 | 150.28 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 119 | 150.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 137 | 150.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 24 | 15 |
| 142 | 150.33 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 147 | 150.36 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 302 | 150.78 | temperature | 30.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 357 | 150.94 | temperature | 30.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 370 | 151.00 | temperature | 25.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 390 | 151.01 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 399 | 151.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 16 |
| 418 | 151.05 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 446 | 151.08 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 20 |
| 447 | 151.09 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 637 | 151.22 | temperature | 25.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 638 | 151.22 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 639 | 151.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 640 | 151.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 641 | 151.23 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 823 | 151.44 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 838 | 151.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 906 | 151.59 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 914 | 151.62 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 916 | 151.62 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 935 | 151.65 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 937 | 151.65 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 938 | 151.65 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 940 | 151.65 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 954 | 151.66 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 990 | 151.77 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 14 | 5 |