Os11g0634500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein S14 family protein.
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Os11g0634500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein S14 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.15 | 0.465 | 13.2 | -0.525 | 1.08 | 1.21 | 0.948 | -1.85 | -0.197 | 17.6 | 20.5 | 2815 | -- | -- |
| 103.98 | 0.475 | 13.2 | -0.185 | 1.07 | 1.51 | 0.855 | -- | -0.13 | 17.4 | 20.44 | 2713 | -- | -- |
| 100.24 | 0.466 | 13.2 | -0.523 | 1.09 | 1.21 | -- | -1.85 | -0.189 | 17.4 | 20.5 | 2729 | -- | -- |
| 105.83 | 0.479 | 13.2 | -0.219 | 1.09 | 1.6 | -- | -- | -0.0974 | 17.5 | 19.81 | 2753 | -- | -- |
| 159.34 | 0.588 | 13.2 | -0.408 | -- | 1.25 | -- | -1.51 | -0.192 | -- | 20.9 | 2022 | -- | -- |
| 151.11 | 0.576 | 13.1 | 0.641 | 1.02 | -- | 1.3 | -- | 0.286 | 17.7 | -- | -- | -- | -- |
| 155.18 | 0.583 | 13.1 | 0.634 | 1.03 | -- | -- | -- | 0.292 | 17.6 | -- | -- | -- | -- |
| 163.79 | 0.596 | 13.2 | -0.356 | -- | 1.67 | -- | -- | -0.154 | -- | 19.7 | 3333 | -- | -- |
| 106.75 | 0.481 | 13.2 | -- | 1.09 | 1.5 | -- | -- | -0.0641 | 17.5 | 19.8 | 2748 | -- | -- |
| 210.31 | 0.678 | 13.1 | 0.601 | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
| 165.77 | 0.602 | 13.1 | -- | 1.02 | -- | -- | -- | 0.221 | 17.7 | -- | -- | -- | -- |
| 162.19 | 0.593 | 13.1 | -- | -- | 1.46 | -- | -- | -0.0695 | -- | 20.6 | 1778 | -- | -- |
| 219.83 | 0.692 | 13.1 | -- | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.94 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 2 | 96.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 8 |
| 5 | 97.05 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 28 | 97.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 41 | 97.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 54 | 98.22 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 58 | 98.29 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 60 | 98.33 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 71 | 98.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 72 | 98.51 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 98 | 98.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 101 | 98.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 121 | 99.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 125 | 99.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 184 | 99.44 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 218 | 99.74 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 272 | 100.06 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 330 | 100.38 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 470 | 100.96 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 479 | 100.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 633 | 101.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 634 | 101.50 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 683 | 101.66 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 689 | 101.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 717 | 101.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 23 |
| 837 | 102.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 881 | 102.17 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 945 | 102.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 19 |