Os11g0623700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0623700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.33 | 0.595 | 6.56 | 1.32 | 1.01 | 1.29 | 0.502 | 0.0647 | -0.6 | 18.5 | 0.17 | 96 | -- | -- |
| 160.35 | 0.59 | 6.56 | 1.32 | 1.01 | 1.28 | 0.51 | -- | -0.6 | 18.5 | 0.17 | 95 | -- | -- |
| 160.94 | 0.591 | 6.56 | 1.31 | 1.02 | 1.28 | -- | 0.102 | -0.599 | 18.5 | 0.1875 | 95 | -- | -- |
| 161 | 0.591 | 6.56 | 1.31 | 1.01 | 1.28 | -- | -- | -0.598 | 18.5 | 0.1848 | 95 | -- | -- |
| 191.35 | 0.648 | 6.55 | 1.28 | -- | 1.3 | -- | 0.0647 | -0.669 | -- | 1.195 | 32 | -- | -- |
| 184.57 | 0.637 | 6.6 | 1.22 | 1.78 | -- | 0.316 | -- | -0.691 | 22.3 | -- | -- | -- | -- |
| 184.97 | 0.637 | 6.6 | 1.2 | 1.77 | -- | -- | -- | -0.691 | 22.3 | -- | -- | -- | -- |
| 190.62 | 0.646 | 6.55 | 1.29 | -- | 1.3 | -- | -- | -0.67 | -- | 0.56 | 63 | -- | -- |
| 206.53 | 0.669 | 6.58 | -- | 1.01 | 1.34 | -- | -- | -0.67 | 18.2 | 0.6163 | 100 | -- | -- |
| 376.65 | 0.907 | 6.55 | 1.23 | -- | -- | -- | -- | -0.687 | -- | -- | -- | -- | -- |
| 223.16 | 0.699 | 6.63 | -- | 1.78 | -- | -- | -- | -0.825 | 22.3 | -- | -- | -- | -- |
| 233.17 | 0.714 | 6.58 | -- | -- | 1.3 | -- | -- | -0.801 | -- | 1.742 | 41 | -- | -- |
| 416.61 | 0.953 | 6.58 | -- | -- | -- | -- | -- | -0.823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.99 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 2 | 151.09 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 13 | 152.81 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 15 |
| 14 | 153.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 17 | 153.56 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 23 | 153.90 | radiation | 1.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 26 | 154.08 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 10 | 19 |
| 33 | 154.49 | humidity | 90.0 | 30 | < th | dose independent | rect. | 16 | 16 |
| 35 | 154.52 | radiation | 1.0 | 90 | > th | dose independent | sin | 11 | NA |
| 36 | 154.56 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 59 | 155.63 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 63 | 155.68 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 82 | 155.94 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 106 | 156.83 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 151 | 157.74 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 191 | 158.65 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 202 | 158.92 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 5 |
| 212 | 159.10 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 219 | 159.19 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 232 | 159.28 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 249 | 159.44 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 21 | 8 |
| 267 | 159.60 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 5 |
| 282 | 159.89 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 18 |
| 287 | 159.94 | humidity | 90.0 | 30 | > th | dose independent | rect. | 11 | 18 |
| 308 | 160.00 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 313 | 160.05 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 325 | 160.09 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 327 | 160.09 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 349 | 160.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 3 |
| 350 | 160.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 351 | 160.27 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 352 | 160.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 365 | 160.31 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 21 |
| 369 | 160.34 | wind | 7.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 374 | 160.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 376 | 160.38 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 377 | 160.38 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 380 | 160.38 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 381 | 160.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 382 | 160.39 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 384 | 160.42 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 398 | 160.58 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 18 |
| 401 | 160.61 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 402 | 160.62 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 403 | 160.63 | temperature | 25.0 | 270 | < th | dose independent | sin | 6 | NA |
| 406 | 160.65 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 23 | 6 |
| 410 | 160.69 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 416 | 160.71 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 5 |
| 418 | 160.73 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 20 |
| 424 | 160.78 | wind | 3.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 434 | 160.85 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 442 | 160.89 | humidity | 90.0 | 30 | < th | dose independent | rect. | 12 | 20 |
| 446 | 160.92 | humidity | 90.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 464 | 161.01 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 467 | 161.07 | temperature | 15.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 470 | 161.09 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 487 | 161.20 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 8 | 21 |
| 498 | 161.26 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 17 | 15 |
| 501 | 161.29 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 516 | 161.40 | humidity | 50.0 | 10 | > th | dose independent | rect. | 10 | 19 |
| 534 | 161.47 | temperature | 25.0 | 270 | > th | dose independent | sin | 6 | NA |
| 535 | 161.47 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 536 | 161.48 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 9 |
| 542 | 161.49 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 15 |
| 556 | 161.54 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 21 |
| 570 | 161.64 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 5 |
| 576 | 161.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 580 | 161.71 | wind | 9.0 | 10 | < th | dose independent | rect. | 10 | 19 |
| 581 | 161.71 | radiation | 1.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 583 | 161.73 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 5 |
| 584 | 161.73 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 596 | 161.79 | humidity | 80.0 | 270 | > th | dose independent | rect. | 10 | 17 |
| 607 | 161.85 | temperature | 15.0 | 30 | > th | dose independent | rect. | 16 | 16 |
| 608 | 161.86 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 609 | 161.86 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 5 |
| 613 | 161.86 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 614 | 161.86 | temperature | 10.0 | 10 | > th | dose independent | rect. | 10 | 19 |
| 656 | 162.04 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 659 | 162.05 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 22 |
| 660 | 162.05 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 664 | 162.06 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 666 | 162.07 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 10 | 19 |
| 678 | 162.11 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 687 | 162.14 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 5 |
| 702 | 162.17 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 5 |
| 715 | 162.19 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 716 | 162.19 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 719 | 162.20 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 729 | 162.22 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 734 | 162.24 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 5 |
| 756 | 162.28 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 9 |
| 760 | 162.28 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 781 | 162.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 784 | 162.36 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 21 |
| 786 | 162.36 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 823 | 162.49 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 16 |
| 839 | 162.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 16 |
| 846 | 162.56 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 11 |
| 847 | 162.56 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 14 |
| 860 | 162.60 | humidity | 90.0 | 30 | > th | dose independent | rect. | 13 | 16 |
| 872 | 162.63 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 11 |
| 889 | 162.66 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 892 | 162.66 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 902 | 162.68 | temperature | 20.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 939 | 162.77 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 10 | 19 |
| 954 | 162.82 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 956 | 162.83 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 964 | 162.85 | temperature | 20.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 979 | 162.90 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 5 |
| 980 | 162.91 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 993 | 162.92 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 7 |