Os11g0621500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to EARLY FLOWERING 4 (Fragment).
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Os11g0621500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to EARLY FLOWERING 4 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.17 | 0.298 | 12.2 | -0.143 | 1.13 | 0.729 | -0.0191 | -2.63 | 0.182 | 1.22 | 22.8 | 1184 | -- | -- |
| 43.42 | 0.307 | 12.1 | 0.454 | 1.18 | 0.612 | -0.154 | -- | 0.335 | 1.16 | 18.26 | 2829 | -- | -- |
| 40.17 | 0.295 | 12.2 | -0.136 | 1.13 | 0.732 | -- | -2.6 | 0.181 | 1.23 | 22.67 | 1177 | -- | -- |
| 43.36 | 0.307 | 12.1 | 0.491 | 1.19 | 0.613 | -- | -- | 0.356 | 1.11 | 16.77 | 2866 | -- | -- |
| 108.74 | 0.486 | 12.2 | -0.256 | -- | 1.25 | -- | -3.31 | 0.185 | -- | 23.7 | 1044 | -- | -- |
| 52.05 | 0.338 | 12.1 | 0.744 | 1.23 | -- | -0.167 | -- | 0.487 | 1.18 | -- | -- | -- | -- |
| 52.17 | 0.338 | 12.1 | 0.75 | 1.23 | -- | -- | -- | 0.488 | 1.18 | -- | -- | -- | -- |
| 113.42 | 0.496 | 12.1 | 0.403 | -- | 1.27 | -- | -- | 0.277 | -- | 16.7 | 993 | -- | -- |
| 46.63 | 0.318 | 12.2 | -- | 1.19 | 0.908 | -- | -- | 0.26 | 1.19 | 14.3 | 5392 | -- | -- |
| 146.37 | 0.565 | 12.1 | 0.797 | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
| 66.98 | 0.383 | 12.1 | -- | 1.25 | -- | -- | -- | 0.404 | 1.2 | -- | -- | -- | -- |
| 117.22 | 0.504 | 12.2 | -- | -- | 1.46 | -- | -- | 0.211 | -- | 16.21 | 1001 | -- | -- |
| 163.14 | 0.596 | 12.1 | -- | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.70 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 2 | 38.25 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 3 | 38.41 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 4 | 38.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 5 | 38.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 7 | 38.53 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 16 | 38.71 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 17 | 38.71 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 24 | 38.90 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 38 | 39.15 | radiation | 40 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 45 | 39.23 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 47 | 39.25 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 66 | 39.36 | temperature | 15 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 71 | 39.37 | temperature | 15 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 145 | 39.45 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 176 | 39.48 | temperature | 15 | 43200 | < th | dose independent | sin | 11 | NA |
| 192 | 39.49 | temperature | 15 | 43200 | > th | dose independent | sin | 12 | NA |
| 204 | 39.49 | radiation | 40 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 221 | 39.50 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 236 | 39.51 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 269 | 39.52 | radiation | 40 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 284 | 39.53 | radiation | 10 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 303 | 39.53 | radiation | 10 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 360 | 39.55 | radiation | 10 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 428 | 39.57 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 548 | 39.61 | radiation | 20 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 559 | 39.61 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 644 | 39.62 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 645 | 39.63 | temperature | 15 | 43200 | > th | dose independent | no | NA | NA |
| 683 | 39.64 | temperature | 15 | 43200 | < th | dose independent | no | NA | NA |
| 708 | 39.64 | temperature | 15 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 791 | 39.68 | radiation | 30 | 43200 | < th | dose independent | sin | 9 | NA |
| 793 | 39.68 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 795 | 39.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 860 | 39.69 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 875 | 39.69 | temperature | 15 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 908 | 39.71 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 966 | 39.75 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 1 |