Os11g0621300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1399 family protein.
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Os11g0621300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1399 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.81 | 0.273 | 11.9 | 1.17 | 1.58 | 1.03 | 0.853 | 0.74 | 0.864 | 18.8 | 1.19 | 14284 | -- | -- |
| 34.3 | 0.273 | 11.9 | 1.37 | 1.58 | 0.906 | 0.833 | -- | 0.866 | 18.8 | 1.18 | 15736 | -- | -- |
| 35.64 | 0.278 | 11.9 | 1.16 | 1.58 | 1.01 | -- | 0.709 | 0.864 | 18.8 | 1.19 | 14326 | -- | -- |
| 35.84 | 0.279 | 11.9 | 1.35 | 1.59 | 0.93 | -- | -- | 0.922 | 18.8 | 1.19 | 15752 | -- | -- |
| 159.78 | 0.589 | 11.9 | 1.2 | -- | 1.04 | -- | 0.833 | 0.87 | -- | 1.17 | 17325 | -- | -- |
| 53.99 | 0.344 | 12 | 0.997 | 1.55 | -- | 0.906 | -- | 0.633 | 18.6 | -- | -- | -- | -- |
| 56.04 | 0.351 | 12 | 0.983 | 1.56 | -- | -- | -- | 0.635 | 18.6 | -- | -- | -- | -- |
| 160.05 | 0.589 | 11.9 | 1.46 | -- | 0.945 | -- | -- | 0.959 | -- | 1.292 | 17333 | -- | -- |
| 73.65 | 0.4 | 12 | -- | 1.55 | 0.52 | -- | -- | 0.772 | 18.6 | 37.64 | 15172 | -- | -- |
| 182.57 | 0.631 | 12 | 0.946 | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
| 81.48 | 0.422 | 12 | -- | 1.55 | -- | -- | -- | 0.526 | 18.7 | -- | -- | -- | -- |
| 197.68 | 0.655 | 11.9 | -- | -- | 0.474 | -- | -- | 0.657 | -- | 46.13 | 15851 | -- | -- |
| 206.16 | 0.67 | 12 | -- | -- | -- | -- | -- | 0.499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.92 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 33.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 3 | 33.20 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 4 | 33.29 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 5 | 33.31 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 7 | 33.34 | temperature | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 30 | 33.59 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 45 | 33.62 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 58 | 33.64 | temperature | 10 | 14400 | > th | dose dependent | sin | 7 | NA |
| 80 | 33.66 | temperature | 10 | 14400 | > th | dose dependent | rect. | 20 | 14 |
| 99 | 33.67 | temperature | 30 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 171 | 33.71 | temperature | 30 | 14400 | < th | dose dependent | sin | 9 | NA |
| 172 | 33.71 | temperature | 25 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 181 | 33.71 | temperature | 10 | 14400 | > th | dose dependent | rect. | 14 | 18 |
| 192 | 33.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 193 | 33.72 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 280 | 33.75 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 318 | 33.76 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 334 | 33.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 336 | 33.77 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 337 | 33.77 | humidity | 90 | 43200 | < th | dose independent | rect. | 7 | 14 |
| 338 | 33.77 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 339 | 33.77 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 357 | 33.77 | temperature | 10 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 359 | 33.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 399 | 33.80 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 423 | 33.80 | temperature | 10 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 441 | 33.81 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 461 | 33.81 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 467 | 33.81 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 480 | 33.82 | radiation | 1 | 14400 | > th | dose independent | sin | 9 | NA |
| 562 | 33.84 | radiation | 1 | 14400 | < th | dose independent | sin | 9 | NA |
| 616 | 33.86 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 646 | 33.87 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 689 | 33.88 | temperature | 30 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 772 | 33.90 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 16 |
| 843 | 33.91 | temperature | 10 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 918 | 33.92 | temperature | 10 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 919 | 33.92 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 1 |