Os11g0615700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5).
FiT-DB / Search/ Help/ Sample detail
|
Os11g0615700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.83 | 0.187 | 13.1 | -0.0356 | 0.404 | -0.18 | 0.102 | -1.02 | 0.0308 | 23.1 | 20.4 | 821 | -- | -- |
| 18.11 | 0.198 | 13.1 | 0.171 | 0.403 | -0.144 | -0.166 | -- | 0.102 | 23.2 | 25.9 | 1329 | -- | -- |
| 15.87 | 0.186 | 13.1 | -0.0385 | 0.403 | -0.173 | -- | -0.984 | 0.0334 | 23.2 | 20.52 | 813 | -- | -- |
| 18.22 | 0.199 | 13.1 | 0.169 | 0.401 | -0.149 | -- | -- | 0.105 | 23.3 | 25.9 | 1315 | -- | -- |
| 25.21 | 0.234 | 13.1 | -0.089 | -- | -0.0869 | -- | -1.04 | 0.0103 | -- | 21.4 | 3109 | -- | -- |
| 18.58 | 0.202 | 13.1 | 0.117 | 0.382 | -- | -0.176 | -- | 0.0554 | 23.3 | -- | -- | -- | -- |
| 18.72 | 0.203 | 13.1 | 0.124 | 0.383 | -- | -- | -- | 0.0561 | 23.3 | -- | -- | -- | -- |
| 26.1 | 0.239 | 13.1 | 0.162 | -- | -0.131 | -- | -- | 0.0982 | -- | 25.9 | 1315 | -- | -- |
| 18.88 | 0.202 | 13.1 | -- | 0.394 | -0.0896 | -- | -- | 0.0669 | 23.4 | 25.82 | 1306 | -- | -- |
| 27.89 | 0.247 | 13.1 | 0.133 | -- | -- | -- | -- | 0.0597 | -- | -- | -- | -- | -- |
| 19.12 | 0.205 | 13.1 | -- | 0.384 | -- | -- | -- | 0.0424 | 23.3 | -- | -- | -- | -- |
| 26.65 | 0.241 | 13.1 | -- | -- | -0.139 | -- | -- | 0.0652 | -- | 27.5 | 839 | -- | -- |
| 28.35 | 0.249 | 13.1 | -- | -- | -- | -- | -- | 0.0449 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 5 | 15.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 6 | 15.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 7 | 15.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 14 | 15.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 18 | 15.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 19 | 15.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 26 | 15.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 43 | 15.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 50 | 15.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 54 | 15.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 57 | 15.52 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 78 | 15.54 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 95 | 15.56 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 106 | 15.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 134 | 15.59 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 13 |
| 207 | 15.65 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 19 |
| 335 | 15.76 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 357 | 15.77 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 403 | 15.79 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 20 |
| 499 | 15.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 535 | 15.86 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 565 | 15.87 | radiation | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 656 | 15.90 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 682 | 15.91 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 683 | 15.91 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 747 | 15.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 748 | 15.93 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 767 | 15.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 786 | 15.94 | radiation | 30 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 874 | 15.96 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 878 | 15.96 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 885 | 15.96 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 888 | 15.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 930 | 15.97 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 20 |
| 998 | 15.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |