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Os11g0615000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : LNS2, Lipin/Ned1/Smp2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0221) R2 : 0.619
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.76 (0.0655) R2dE : 0.719 R2E : 0.353
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.716 (0.0497) R2dN8 : 0.266 R2N8 : -0.0999
σ : 0.407
deviance : 76.28
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 11.1
memory length : 47520
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.03 0.367 11.4 -0.241 0.0862 -1.3 -1.44 1.89 0.733 13.4 19.61 20733 -- --
64.35 0.374 11.5 -0.414 0.089 -1.42 -1.4 -- 0.63 12.7 16.45 28069 -- --
68.52 0.386 11.4 -0.257 0.142 -1.26 -- 2.18 0.732 9.49 20.27 20869 -- --
70.21 0.39 11.5 -0.593 0.168 -1.49 -- -- 0.56 9.18 16.1 21612 -- --
69.68 0.389 11.4 -0.259 -- -1.28 -- 2.11 0.737 -- 20.19 20931 -- --
99.48 0.468 11.7 -1.79 0.129 -- -1.35 -- -0.00999 13.1 -- -- -- --
106.06 0.482 11.7 -1.84 0.185 -- -- -- -0.0198 9.88 -- -- -- --
71.52 0.394 11.5 -0.552 -- -1.52 -- -- 0.566 -- 15.48 22368 -- --
74.76 0.403 11.5 -- 0.162 -1.76 -- -- 0.714 9.13 11.08 47520 -- --
108.11 0.486 11.7 -1.84 -- -- -- -- -0.0198 -- -- -- -- --
195.2 0.654 11.6 -- 0.194 -- -- -- 0.185 10.6 -- -- -- --
76.28 0.407 11.5 -- -- -1.76 -- -- 0.716 -- 11.1 47520 -- --
197.52 0.656 11.6 -- -- -- -- -- 0.184 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.52 temperature 15 43200 > th dose independent rect. 24 1
2 58.65 temperature 15 43200 < th dose dependent rect. 1 1
4 58.98 radiation 1 43200 < th dose independent rect. 7 5
5 58.98 radiation 30 43200 > th dose dependent rect. 16 16
6 59.02 radiation 1 43200 > th dose independent rect. 7 5
7 59.03 radiation 1 43200 < th dose dependent rect. 7 1
9 59.10 humidity 70 43200 > th dose dependent rect. 14 1
10 59.15 radiation 1 43200 < th dose dependent rect. 7 5
11 59.16 temperature 15 43200 < th dose dependent rect. 23 3
19 59.29 humidity 80 43200 > th dose independent rect. 13 1
20 59.30 radiation 1 43200 > th dose independent rect. 10 2
21 59.34 radiation 1 43200 < th dose independent rect. 10 2
22 59.34 radiation 1 43200 < th dose dependent rect. 10 2
23 59.35 radiation 1 43200 < th dose independent rect. 7 2
30 59.41 temperature 20 43200 > th dose independent rect. 14 1
31 59.42 radiation 1 43200 > th dose independent rect. 7 2
32 59.42 humidity 80 43200 > th dose dependent rect. 1 18
33 59.43 radiation 30 43200 > th dose dependent rect. 7 1
61 59.52 temperature 20 43200 < th dose independent rect. 14 2
68 59.57 humidity 80 43200 < th dose independent rect. 13 3
78 59.66 temperature 15 43200 < th dose independent rect. 2 1
83 59.69 temperature 15 43200 < th dose independent rect. 24 3
127 59.95 humidity 80 43200 > th dose dependent rect. 9 18
130 59.97 humidity 80 43200 > th dose dependent rect. 10 16
134 59.98 temperature 20 43200 < th dose dependent rect. 11 1
140 60.00 humidity 80 43200 > th dose independent rect. 11 5
148 60.02 humidity 80 43200 > th dose dependent rect. 10 5
186 60.18 radiation 40 43200 < th dose independent rect. 19 13
190 60.20 radiation 40 43200 < th dose independent rect. 6 2
192 60.20 radiation 40 43200 < th dose independent rect. 22 10
203 60.23 radiation 40 43200 < th dose independent rect. 24 8
230 60.32 humidity 80 43200 > th dose dependent sin 3 NA
233 60.33 humidity 80 43200 > th dose dependent rect. 2 23
265 60.47 humidity 90 43200 > th dose independent rect. 13 13
285 60.54 temperature 20 43200 < th dose dependent rect. 11 12
290 60.57 radiation 30 43200 < th dose independent rect. 16 1
300 60.59 temperature 15 43200 > th dose independent rect. 23 13
305 60.61 radiation 30 43200 > th dose independent rect. 7 1
330 60.63 humidity 90 43200 > th dose independent rect. 10 17
339 60.64 humidity 80 43200 > th dose dependent no NA NA
343 60.65 radiation 30 43200 < th dose independent rect. 16 7
362 60.68 temperature 20 43200 < th dose dependent sin 20 NA
386 60.72 humidity 90 43200 > th dose independent rect. 7 21
388 60.72 temperature 20 43200 < th dose dependent rect. 7 16
398 60.74 temperature 20 43200 < th dose dependent rect. 7 13
409 60.76 humidity 80 43200 > th dose dependent sin 17 NA
410 60.76 temperature 20 43200 < th dose dependent rect. 10 5
427 60.79 temperature 20 43200 < th dose dependent rect. 7 10
440 60.81 humidity 90 43200 > th dose independent sin 17 NA
492 60.88 humidity 80 43200 > th dose dependent rect. 14 23
529 60.93 humidity 90 43200 > th dose dependent rect. 12 20
552 60.97 temperature 20 43200 < th dose dependent rect. 16 4
583 61.00 humidity 90 43200 > th dose independent rect. 23 21
630 61.06 temperature 15 43200 > th dose independent sin 8 NA
641 61.07 humidity 90 43200 > th dose independent rect. 10 22
652 61.08 humidity 90 43200 > th dose independent rect. 13 22
671 61.11 humidity 90 43200 > th dose independent rect. 12 20
802 61.26 humidity 90 43200 > th dose independent no NA NA
805 61.26 humidity 80 43200 > th dose independent rect. 4 14
877 61.32 humidity 90 43200 > th dose independent rect. 16 23
974 61.41 radiation 1 43200 < th dose dependent rect. 23 15
984 61.42 radiation 1 43200 < th dose dependent rect. 4 10