Os11g0609900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0609900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 220 | 0.697 | 4.86 | -1.59 | 0.829 | 3.66 | 0.0646 | -1.77 | -2.5 | 20.3 | 9.813 | 287 | -- | -- |
| 222.16 | 0.694 | 4.82 | -1.32 | 0.823 | 3.62 | -0.0689 | -- | -2.42 | 20.3 | 8.244 | 287 | -- | -- |
| 220.02 | 0.691 | 4.85 | -1.59 | 0.829 | 3.66 | -- | -1.75 | -2.49 | 20.3 | 9.719 | 287 | -- | -- |
| 222.17 | 0.694 | 4.82 | -1.32 | 0.817 | 3.62 | -- | -- | -2.42 | 20.3 | 8.122 | 290 | -- | -- |
| 242.31 | 0.725 | 4.85 | -1.74 | -- | 4.22 | -- | -1.68 | -2.6 | -- | 6.294 | 407 | -- | -- |
| 360.75 | 0.89 | 4.72 | -0.538 | 1.67 | -- | 0.395 | -- | -1.91 | 18.4 | -- | -- | -- | -- |
| 361.14 | 0.89 | 4.72 | -0.543 | 1.68 | -- | -- | -- | -1.91 | 18.4 | -- | -- | -- | -- |
| 244.28 | 0.728 | 4.82 | -1.47 | -- | 4.17 | -- | -- | -2.52 | -- | 6.474 | 409 | -- | -- |
| 263.74 | 0.756 | 4.78 | -- | 0.992 | 3.01 | -- | -- | -2.2 | 19.8 | 13.86 | 257 | -- | -- |
| 507.02 | 1.05 | 4.69 | -0.586 | -- | -- | -- | -- | -1.94 | -- | -- | -- | -- | -- |
| 368.9 | 0.898 | 4.71 | -- | 1.68 | -- | -- | -- | -1.84 | 18.4 | -- | -- | -- | -- |
| 288.77 | 0.791 | 4.77 | -- | -- | 2.87 | -- | -- | -2.29 | -- | 20.73 | 409 | -- | -- |
| 516.09 | 1.06 | 4.67 | -- | -- | -- | -- | -- | -1.88 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 3 | 220.17 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 8 | 221.45 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 13 | 222.90 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 14 | 222.90 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 19 | 223.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 22 | 223.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 24 | 224.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 27 | 224.44 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 37 | 225.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 65 | 227.13 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 66 | 227.16 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 79 | 227.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 153 | 230.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 164 | 230.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 204 | 231.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 206 | 231.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 222 | 231.75 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 236 | 232.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 255 | 232.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 268 | 232.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 359 | 234.47 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 11 |
| 374 | 234.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 388 | 235.10 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 11 |
| 405 | 235.41 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 411 | 235.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 413 | 235.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 429 | 235.64 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 434 | 235.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 446 | 235.72 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 452 | 235.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 453 | 235.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 16 |
| 463 | 235.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 468 | 235.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 600 | 236.45 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 705 | 237.20 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 726 | 237.40 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 734 | 237.45 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 795 | 237.89 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 17 |
| 810 | 237.98 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 16 |
| 825 | 238.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 863 | 238.26 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 867 | 238.30 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 879 | 238.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 913 | 238.53 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 924 | 238.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 14 |
| 938 | 238.65 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 20 |
| 953 | 238.75 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 964 | 238.75 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 974 | 238.79 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 20 |
| 976 | 238.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |