Os11g0600900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mannose-6-phosphate isomerase (ManA).
FiT-DB / Search/ Help/ Sample detail
|
Os11g0600900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Mannose-6-phosphate isomerase (ManA).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 277.13 | 0.782 | 8.53 | -0.851 | 6.09 | 2.95 | 1.27 | -3.15 | -0.373 | 5.41 | 23.9 | 95 | 10.7 | -- |
| 286.7 | 0.789 | 8.56 | -1.03 | 6.07 | 3.51 | 1.34 | -- | -0.403 | 5.37 | 23.35 | 140 | 11.4 | -- |
| 280.52 | 0.78 | 8.53 | -0.819 | 6.12 | 2.85 | -- | -3.23 | -0.374 | 5.38 | 23.9 | 94 | 11 | -- |
| 290.74 | 0.794 | 8.57 | -1.05 | 6.1 | 3.58 | -- | -- | -0.432 | 5.37 | 23.26 | 147 | 11.7 | -- |
| 380.48 | 0.908 | 8.69 | -0.98 | -- | 6.85 | -- | 2.82 | -0.355 | -- | 51.02 | 34 | 0.916 | -- |
| 391.62 | 0.928 | 8.65 | -1.6 | 6.04 | -- | 1.15 | -- | -0.767 | 5.07 | -- | -- | -- | -- |
| 394.91 | 0.931 | 8.66 | -1.6 | 6.05 | -- | -- | -- | -0.772 | 5.05 | -- | -- | -- | -- |
| 365.45 | 0.89 | 8.7 | -1.39 | -- | 6.85 | -- | -- | -0.518 | -- | 59.05 | 64 | 1.3 | -- |
| 313.7 | 0.825 | 8.53 | -- | 6.1 | 4.07 | -- | -- | -0.266 | 5.36 | 23.38 | 243 | 12.9 | -- |
| 2313.03 | 2.25 | 8.72 | -1.39 | -- | -- | -- | -- | -0.618 | -- | -- | -- | -- | -- |
| 462.78 | 1.01 | 8.62 | -- | 6.02 | -- | -- | -- | -0.594 | 5.06 | -- | -- | -- | -- |
| 409.97 | 0.943 | 8.64 | -- | -- | 6.96 | -- | -- | -0.309 | -- | 53 | 65 | 1.32 | -- |
| 2363.79 | 2.27 | 8.69 | -- | -- | -- | -- | -- | -0.464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 279.63 | temperature | 25 | 90 | < th | dose dependent | sin | 16 | NA |
| 15 | 287.02 | temperature | 20 | 90 | < th | dose independent | sin | 16 | NA |
| 19 | 287.89 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 20 | 287.95 | temperature | 20 | 10 | < th | dose independent | sin | 15 | NA |
| 21 | 288.29 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 13 |
| 24 | 288.66 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 15 |
| 29 | 289.10 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 16 |
| 34 | 290.04 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 36 | 290.20 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 19 |
| 44 | 291.07 | temperature | 20 | 270 | > th | dose independent | sin | 19 | NA |
| 45 | 291.11 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 12 |
| 52 | 291.99 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 14 |
| 74 | 293.37 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 86 | 293.57 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 12 |
| 104 | 294.25 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 105 | 294.28 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 14 |
| 180 | 295.97 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 201 | 296.39 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 225 | 297.09 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 12 |
| 258 | 298.00 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 16 |
| 284 | 298.60 | temperature | 20 | 10 | < th | dose independent | rect. | 10 | 18 |
| 311 | 299.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 316 | 299.15 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 364 | 299.79 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 14 |
| 376 | 299.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 508 | 302.24 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 513 | 302.30 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 544 | 302.70 | temperature | 20 | 10 | < th | dose independent | rect. | 6 | 22 |
| 692 | 304.59 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 703 | 304.68 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 714 | 304.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 716 | 304.89 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 721 | 304.94 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 731 | 305.09 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 23 |
| 744 | 305.19 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 22 |
| 777 | 305.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 787 | 305.84 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 980 | 308.35 | temperature | 20 | 10 | > th | dose independent | rect. | 13 | 23 |