Os11g0598900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os11g0598900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.37 | 0.478 | 2.9 | 0.0316 | 0.089 | -3.88 | -0.495 | -6.73 | 0.0594 | 7.84 | 9.1 | 31 | -- | -- |
| 109.12 | 0.487 | 2.88 | 0.118 | 0.0949 | -3.31 | -0.638 | -- | 0.11 | 7.91 | 9.119 | 31 | -- | -- |
| 103.97 | 0.475 | 2.9 | 0.0305 | 0.0892 | -3.88 | -- | -6.73 | 0.0593 | 7.17 | 9.1 | 31 | -- | -- |
| 105.52 | 0.478 | 2.88 | -0.0334 | 0.147 | -2.19 | -- | -- | 0.0604 | 5.78 | 9.1 | 31 | -- | -- |
| 104.5 | 0.476 | 2.9 | 0.0151 | -- | -3.76 | -- | -6.42 | 0.0598 | -- | 9.1 | 31 | -- | -- |
| 117.13 | 0.507 | 2.89 | -0.134 | 0.0502 | -- | -0.437 | -- | 0.0174 | 10.7 | -- | -- | -- | -- |
| 117.78 | 0.508 | 2.89 | -0.153 | 0.0761 | -- | -- | -- | 0.0148 | 7.77 | -- | -- | -- | -- |
| 106.2 | 0.48 | 2.88 | -0.0212 | -- | -2.11 | -- | -- | 0.0653 | -- | 9.12 | 31 | -- | -- |
| 105.47 | 0.478 | 2.88 | -- | 0.12 | -2.19 | -- | -- | 0.0663 | 5.48 | 9.135 | 31 | -- | -- |
| 118.09 | 0.508 | 2.89 | -0.152 | -- | -- | -- | -- | 0.0158 | -- | -- | -- | -- | -- |
| 118.39 | 0.509 | 2.88 | -- | 0.075 | -- | -- | -- | 0.0318 | 7.91 | -- | -- | -- | -- |
| 106.21 | 0.48 | 2.88 | -- | -- | -2.13 | -- | -- | 0.0677 | -- | 9.156 | 31 | -- | -- |
| 118.7 | 0.509 | 2.89 | -- | -- | -- | -- | -- | 0.0327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.57 | wind | 9 | 30 | > th | dose dependent | rect. | 21 | 17 |
| 9 | 98.98 | humidity | 60 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 10 | 99.01 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 11 | 99.01 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 12 | 99.02 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 6 |
| 14 | 99.03 | humidity | 60 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 15 | 99.04 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 18 | 99.05 | humidity | 60 | 30 | < th | dose independent | rect. | 17 | 17 |
| 36 | 99.08 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 58 | 99.11 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 76 | 99.12 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 89 | 99.13 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 124 | 99.13 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 202 | 99.14 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 231 | 99.14 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 304 | 99.15 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 357 | 99.30 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 359 | 99.30 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 3 |
| 393 | 99.48 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 395 | 99.49 | wind | 9 | 30 | > th | dose independent | rect. | 21 | 17 |
| 556 | 100.27 | wind | 9 | 90 | > th | dose dependent | rect. | 11 | 3 |
| 557 | 100.35 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 590 | 100.61 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 695 | 101.64 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 1 |
| 770 | 101.94 | wind | 9 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 829 | 102.39 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 843 | 102.52 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 848 | 102.57 | wind | 9 | 90 | > th | dose independent | rect. | 11 | 3 |
| 926 | 102.80 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |