Os11g0592100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Barwin.
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Os11g0592100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Barwin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 539.2 | 1.09 | 6.7 | -0.171 | 1.25 | -2.65 | -0.872 | 0.79 | 0.0135 | 3.8 | 24.44 | 1473 | 17.4 | 1.44 |
| 537.62 | 1.08 | 6.71 | -0.343 | 1.26 | -2.76 | -0.699 | -- | 0.0128 | 3.65 | 24.33 | 1493 | 17.4 | 1.5 |
| 540.18 | 1.08 | 6.7 | -0.127 | 1.25 | -2.8 | -- | 0.98 | 0.0235 | 3.57 | 24.45 | 1491 | 17.5 | 1.48 |
| 539.52 | 1.08 | 6.71 | -0.329 | 1.23 | -2.81 | -- | -- | -0.00935 | 3.62 | 24.35 | 1495 | 17.4 | 1.46 |
| 607.58 | 1.15 | 6.65 | 0.146 | -- | -3.22 | -- | 2 | 0.0955 | -- | 23.85 | 1587 | 16.3 | 2 |
| 756.08 | 1.29 | 6.77 | -0.937 | 1.17 | -- | -1.24 | -- | -0.289 | 4.06 | -- | -- | -- | -- |
| 760.48 | 1.29 | 6.77 | -0.922 | 1.17 | -- | -- | -- | -0.282 | 4.09 | -- | -- | -- | -- |
| 609.95 | 1.15 | 6.7 | -0.269 | -- | -2.97 | -- | -- | -0.0127 | -- | 24.28 | 1586 | 16.5 | 1.85 |
| 542.61 | 1.08 | 6.71 | -- | 1.23 | -2.84 | -- | -- | 0.0184 | 3.61 | 24.3 | 1496 | 17.4 | 1.52 |
| 834.39 | 1.35 | 6.78 | -0.875 | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
| 782.9 | 1.31 | 6.75 | -- | 1.15 | -- | -- | -- | -0.179 | 4.11 | -- | -- | -- | -- |
| 611.16 | 1.15 | 6.73 | -- | -- | -3.01 | -- | -- | -0.0169 | -- | 23.27 | 1597 | 16.5 | 1.87 |
| 854.59 | 1.36 | 6.75 | -- | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 503.02 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 2 | 503.50 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 3 | 503.73 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 4 | 503.88 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 9 |
| 7 | 505.53 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 12 | 9 |
| 11 | 506.89 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 29 | 510.99 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 44 | 512.69 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 78 | 514.79 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 79 | 514.83 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 82 | 514.91 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 84 | 514.97 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 18 |
| 93 | 515.53 | wind | 7.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 97 | 515.62 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 98 | 515.63 | wind | 5.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 112 | 516.33 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 126 | 516.73 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 128 | 516.92 | wind | 7.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 129 | 516.95 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 171 | 518.44 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 190 | 519.01 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 16 |
| 227 | 520.61 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 257 | 521.61 | wind | 5.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 324 | 523.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 334 | 523.78 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 351 | 524.25 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 376 | 524.92 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 377 | 524.93 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 386 | 525.03 | wind | 5.0 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 392 | 525.15 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 432 | 525.87 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 443 | 526.11 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 5 |
| 470 | 526.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 484 | 526.52 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 14 | 21 |
| 573 | 527.64 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 15 |
| 593 | 527.89 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 673 | 529.11 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 674 | 529.11 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 676 | 529.12 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 701 | 529.28 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 718 | 529.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 775 | 530.54 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 785 | 530.65 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 810 | 530.81 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 811 | 530.81 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 812 | 530.82 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 820 | 530.84 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 926 | 532.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |