Os11g0588600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NB-ARC domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0588600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : NB-ARC domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.37 | 0.275 | 12.6 | 0.107 | 0.639 | -2.26 | 3.31 | -3.73 | 0.0474 | 5.44 | 0.43 | 717 | -- | -- |
| 35.89 | 0.279 | 12.7 | 0.0563 | 0.276 | -1.72 | 0.383 | -- | 0.022 | 3.38 | 0.4304 | 680 | -- | -- |
| 37.81 | 0.286 | 12.7 | 0.0647 | 0.438 | -2.17 | -- | 0.179 | 0.0421 | 7 | 0.4948 | 772 | -- | -- |
| 36.31 | 0.281 | 12.7 | 0.0371 | 0.244 | -1.69 | -- | -- | 0.0149 | 3.33 | 0.4353 | 687 | -- | -- |
| 36.69 | 0.282 | 12.7 | 0.0522 | -- | -1.54 | -- | -0.00489 | 0.0549 | -- | 0.4306 | 734 | -- | -- |
| 41.07 | 0.3 | 12.7 | 0.165 | 1.21 | -- | -0.17 | -- | 0.0905 | 17.8 | -- | -- | -- | -- |
| 41.14 | 0.3 | 12.7 | 0.166 | 1.21 | -- | -- | -- | 0.0898 | 17.8 | -- | -- | -- | -- |
| 36.45 | 0.281 | 12.7 | 0.0658 | -- | -1.5 | -- | -- | 0.0351 | -- | 0.43 | 721 | -- | -- |
| 36.33 | 0.281 | 12.7 | -- | 0.242 | -1.68 | -- | -- | 0.0114 | 3.31 | 0.44 | 687 | -- | -- |
| 116.76 | 0.505 | 12.7 | 0.129 | -- | -- | -- | -- | 0.0615 | -- | -- | -- | -- | -- |
| 41.86 | 0.303 | 12.7 | -- | 1.21 | -- | -- | -- | 0.0713 | 17.8 | -- | -- | -- | -- |
| 36.46 | 0.281 | 12.7 | -- | -- | -1.52 | -- | -- | 0.0251 | -- | 0.44 | 729 | -- | -- |
| 117.2 | 0.505 | 12.7 | -- | -- | -- | -- | -- | 0.0472 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.03 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 3 | 34.16 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 4 | 34.17 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 8 | 34.39 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 9 | 34.39 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 2 | 18 |
| 11 | 34.43 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 17 |
| 16 | 34.52 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 29 | 34.64 | radiation | 1.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 34 | 34.68 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 20 |
| 46 | 34.74 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 49 | 34.76 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 59 | 34.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 63 | 34.81 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 64 | 34.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 73 | 34.85 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 74 | 34.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 77 | 34.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 81 | 34.85 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 86 | 34.85 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 87 | 34.85 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 88 | 34.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 98 | 34.87 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 20 |
| 101 | 34.88 | radiation | 1.0 | 720 | < th | dose dependent | no | NA | NA |
| 124 | 35.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 22 |
| 126 | 35.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 22 |
| 130 | 35.02 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 4 |
| 131 | 35.02 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 141 | 35.08 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 4 |
| 148 | 35.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 18 |
| 149 | 35.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 18 |
| 153 | 35.16 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 156 | 35.18 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 157 | 35.18 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 18 |
| 161 | 35.19 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 6 |
| 162 | 35.20 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 20 |
| 163 | 35.20 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 20 |
| 171 | 35.24 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 5 |
| 173 | 35.24 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 175 | 35.25 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 178 | 35.25 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 4 |
| 194 | 35.29 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 195 | 35.29 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 196 | 35.30 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 197 | 35.30 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 199 | 35.30 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 200 | 35.30 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 203 | 35.30 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 208 | 35.30 | humidity | 70.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 209 | 35.30 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 241 | 35.36 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 20 |
| 244 | 35.37 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 245 | 35.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 247 | 35.37 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 248 | 35.37 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 253 | 35.37 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 18 |
| 265 | 35.39 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 270 | 35.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 272 | 35.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 274 | 35.41 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 275 | 35.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 278 | 35.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 279 | 35.41 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 281 | 35.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 287 | 35.41 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 288 | 35.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 290 | 35.41 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 300 | 35.43 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 20 |
| 301 | 35.43 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 20 |
| 307 | 35.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 6 |
| 309 | 35.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 310 | 35.45 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 315 | 35.47 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 18 |
| 320 | 35.48 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 4 |
| 321 | 35.48 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 4 |
| 328 | 35.50 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 331 | 35.50 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 23 |
| 334 | 35.51 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 18 |
| 335 | 35.51 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 345 | 35.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 351 | 35.54 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 23 |
| 354 | 35.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 417 | 35.58 | radiation | 40.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 446 | 35.62 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 472 | 35.66 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 474 | 35.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 477 | 35.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 481 | 35.66 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 486 | 35.66 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 487 | 35.66 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 18 |
| 488 | 35.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 18 |
| 503 | 35.68 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 535 | 35.71 | radiation | 1.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 561 | 35.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 567 | 35.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 11 |
| 568 | 35.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 13 |
| 571 | 35.75 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 577 | 35.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 11 |
| 579 | 35.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 13 |
| 585 | 35.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 592 | 35.77 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 23 |
| 593 | 35.77 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 600 | 35.79 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 16 |
| 614 | 35.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 687 | 35.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 11 |
| 692 | 35.88 | radiation | 1.0 | 720 | < th | dose independent | sin | 13 | NA |
| 711 | 35.88 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 18 |
| 712 | 35.88 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 20 |
| 720 | 35.88 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 20 |
| 732 | 35.90 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 2 |
| 734 | 35.90 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 737 | 35.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 749 | 35.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 755 | 35.94 | radiation | 1.0 | 720 | > th | dose independent | sin | 13 | NA |
| 766 | 35.95 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 18 |
| 771 | 35.96 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 775 | 35.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 13 |
| 780 | 35.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 11 |
| 781 | 35.98 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 11 |
| 782 | 35.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 13 |
| 783 | 35.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 13 |
| 784 | 35.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 13 |
| 792 | 35.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 13 |
| 799 | 36.00 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 11 |
| 816 | 36.04 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 843 | 36.06 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 5 |
| 856 | 36.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 862 | 36.07 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 868 | 36.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 870 | 36.08 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 4 |
| 900 | 36.11 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 909 | 36.11 | wind | 1.0 | 10 | > th | dose dependent | rect. | 2 | 5 |
| 927 | 36.13 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 937 | 36.14 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 6 |
| 952 | 36.16 | radiation | 40.0 | 90 | < th | dose independent | rect. | 7 | 19 |
| 961 | 36.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 987 | 36.20 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 6 |