BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0588600 Os11g0588600|AK066312
(273 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858 73 1e-13
AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927 70 1e-12
AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909 67 1e-11
AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907 66 2e-11
AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836 62 4e-10
AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909 60 9e-10
AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848 59 3e-09
AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902 58 5e-09
AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900 57 9e-09
AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050 57 9e-09
AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050 57 9e-09
AT1G58602.1 | chr1:21760167-21763765 FORWARD LENGTH=1139 57 1e-08
AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928 57 1e-08
AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856 57 1e-08
AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018 56 2e-08
AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901 55 3e-08
AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848 55 4e-08
AT1G58390.1 | chr1:21690962-21693891 REVERSE LENGTH=908 53 2e-07
AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853 49 2e-06
AT4G09420.1 | chr4:5962319-5963776 REVERSE LENGTH=458 49 4e-06
>AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858
Length = 857
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 59 DEQTKIWAWDIRELSYDIEDNIDTFMICVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKI 118
E+ + W IRE SYD ED ++ F + E K+ + ++ + L++ H +
Sbjct: 55 SERVRNWVAGIREASYDAEDILEAFFL---KAESRKQKGMKRVLRRLACILNEAVSLHSV 111
Query: 119 ANEIKDIKSQVREVMERRDRYKIDDVA-----TIPPTFVDPRILTLYENVTKLVGVDKAS 173
+EI++I S++ ++ + I + ++ + + R Y LVG++++
Sbjct: 112 GSEIREITSRLSKIAASMLDFGIKESMGREGLSLSDSLREQRQSFPYVVEHNLVGLEQSL 171
Query: 174 DDLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPE 231
+ L+ L G E KL++ S+ G+GGLGKTTL+K +F K++ FD A+V V Q+
Sbjct: 172 EKLVNDLVSGGE---KLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWVYVSQDCR 228
Query: 232 IKKVLKDILVELN-KDKYMSFDVTTVNERHMINELREYL 269
+ V +DI + L+ KD+ + ++ + + EL +L
Sbjct: 229 RRHVWQDIFLNLSYKDENQR--ILSLRDEQLGEELHRFL 265
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
Length = 926
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 68 DIRELSYDIEDNIDTFMICVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEIKDIKS 127
+ R+L+Y IED +D F + G K I + + RH IA ++ +
Sbjct: 70 NTRDLAYQIEDILDEFGYHIHGYRSCAK------IWRAFHFPRYMWARHSIAQKLGMVNV 123
Query: 128 QVREVMERRDRYKIDD---VATIPP---------TFVDPRILTLYENVTKLVGVDKASDD 175
++ + + RY + A +PP + L EN LVG+D
Sbjct: 124 MIQSISDSMKRYYHSENYQAALLPPIDDGDAKWVNNISESSLFFSEN--SLVGIDAPKGK 181
Query: 176 LMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPEIK 233
L+ RL + P+++ +V+VVG+GG GKTTLS +F ++ F+ A+V + ++ I+
Sbjct: 182 LIGRLLSPE--PQRI-VVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKSYVIE 238
Query: 234 KVLKDILVELNK--DKYMSFDVTTVNERHMINELREYLDNRR 273
V + ++ E K D + ++ ++ R ++ +L EYL ++R
Sbjct: 239 DVFRTMIKEFYKEADTQIPAELYSLGYRELVEKLVEYLQSKR 280
>AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909
Length = 908
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 132/255 (51%), Gaps = 29/255 (11%)
Query: 4 ATGAMGTLLPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTK 63
A G + L KL +LL + + + + E + L +L+S+Q+ L+ ++ +
Sbjct: 2 AEGFVSFGLEKLWDLLSRESERLQGIDEQLDGLKRQLRSLQSLLKDADAK--KHGSDRVR 59
Query: 64 IWAWDIRELSYDIEDNIDTFMIC---VDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIAN 120
+ D+++L +D ED I+++++ +G + KKH + + + L+ RHK+A+
Sbjct: 60 NFLEDVKDLVFDAEDIIESYVLNKLRGEG-KGVKKH-----VRRLARFLTD---RHKVAS 110
Query: 121 EIKDIKSQVREVMERRDRYKI----DDVATIP---PTFVDPRILTLYENVTK--LVGVDK 171
+I+ I ++ +V+ + I D V ++ V I Y + ++ LVGV++
Sbjct: 111 DIEGITKRISDVIGEMQSFGIQQIIDGVRSLSLQERQRVQREIRQTYPDSSESDLVGVEQ 170
Query: 172 ASDDLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQN 229
+ ++L+ L D ++VS+ G+GG+GKTTL++ VF D ++ FD A+V V Q
Sbjct: 171 SVEELVGHLVEND----IYQVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQ 226
Query: 230 PEIKKVLKDILVELN 244
+K V + IL EL
Sbjct: 227 FTLKHVWQRILQELQ 241
>AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907
Length = 906
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 47/249 (18%)
Query: 14 KLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTKIWAWD----I 69
KL +LL ++Y+ + V+E IT L +LK + A L +QT+ A + I
Sbjct: 17 KLWKLLSQEYERFQGVEEQITELRDDLKMLMAFLSDADA------KKQTRALARNCLEEI 70
Query: 70 RELSYDIEDNIDTFMI----------CVDGLEPAKKHNLTWLIDKCHKSLSK-IKIRHKI 118
+E++YD ED I+ F++ C P + + I K +SK I++ +
Sbjct: 71 KEITYDAEDIIEIFLLKGSVNMRSLACF----PGGRREIALQITSISKRISKVIQVMQNL 126
Query: 119 ANEIKDIKSQVREVMERRDRY-KIDDVATIPPTFVDPRILTLYENVTKLVGVDKASDDLM 177
IKS ++M+ D + +++ + TF E+ + LVG++K + L+
Sbjct: 127 G-----IKS---DIMDGVDSHAQLERKRELRHTFSS-------ESESNLVGLEKNVEKLV 171
Query: 178 KRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPEIKKV 235
+ L VG+++ VS+ G+GGLGKTTL++ +F DK+K FD A+V V Q K V
Sbjct: 172 EEL-VGNDSSHG---VSITGLGGLGKTTLARQIFDHDKVKSHFDGLAWVCVSQEFTRKDV 227
Query: 236 LKDILVELN 244
K IL L+
Sbjct: 228 WKTILGNLS 236
>AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836
Length = 835
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 125/252 (49%), Gaps = 26/252 (10%)
Query: 2 EFATGAMGTLLPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQ 61
EF G +G L E+ + +VKE + L EL I L+ V ++ DE
Sbjct: 7 EFVVGKIGNYLI-------EEASMFMAVKEDLEELKTELTCIHGYLKDVE--AREREDEV 57
Query: 62 TKIWAWDIRELSYDIEDNIDTFMICVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANE 121
+K W+ + + +YD+ED +DT+ + ++ E +++ L L +K + + + I ++
Sbjct: 58 SKEWSKLVLDFAYDVEDVLDTYHLKLE--ERSQRRGLRRLTNKIGRKMDA----YSIVDD 111
Query: 122 IKDIKSQVREVMERRDRYKIDDV----ATIPPTFVDPRILTLYENVTK---LVGVDKASD 174
I+ +K ++ ++ +R+ Y I + + + R L +V + +VG++ +
Sbjct: 112 IRILKRRILDITRKRETYGIGGLKEPQGGGNTSSLRVRQLRRARSVDQEEVVVGLEDDAK 171
Query: 175 DLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKLQFDCAAFVPVGQNPEI 232
L+++L D K ++S+ G+GGLGKT L++ +++ +K +F+ A+ V Q +
Sbjct: 172 ILLEKLL--DYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKT 229
Query: 233 KKVLKDILVELN 244
+L I+ L
Sbjct: 230 GDILMRIIRSLG 241
>AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909
Length = 908
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 12 LPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTKIWAWDIRE 71
L KL +LL + + + + + L +L+S+Q+ L+ ++ + + D+++
Sbjct: 10 LEKLWDLLSRESERLQGIDGQLDGLKRQLRSLQSLLKDADAK--KHGSDRVRNFLEDVKD 67
Query: 72 LSYDIEDNIDTFMIC-VDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEIKDIKSQVR 130
L +D ED I+++++ + G K ++ L C + RHK+A++I+ I ++
Sbjct: 68 LVFDAEDIIESYVLNKLSGKGKGVKKHVRRL--ACF-----LTDRHKVASDIEGITKRIS 120
Query: 131 EVMERRDRYKIDDVATIPPTF-------VDPRILTLYENVTK--LVGVDKASDDLMKRLS 181
EV+ + I + + V I Y + ++ LVGV+++ +L+ L
Sbjct: 121 EVIGEMQSFGIQQIIDGGRSLSLQERQRVQREIRQTYPDSSESDLVGVEQSVKELVGHLV 180
Query: 182 VGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPEIKKVLKDI 239
D ++VS+ G+GG+GKTTL++ VF D ++ FD A+V V Q K V + I
Sbjct: 181 ENDVH----QVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQFTQKHVWQRI 236
Query: 240 LVELN 244
L EL
Sbjct: 237 LQELQ 241
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
Length = 847
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 116/236 (49%), Gaps = 39/236 (16%)
Query: 28 SVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTKIWAWDIRELSYDIEDNIDTFMICV 87
VK+ + L EL I L+ V ++ DE +K W + +++YDIED +DT+ + +
Sbjct: 26 GVKDDLEELKTELTCIHGYLKDVE--AREREDEVSKEWTKLVLDIAYDIEDVLDTYFLKL 83
Query: 88 DGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEIKDIKSQVREVMERRDRYKIDDVATI 147
+ E + + L L +K + K + + I +I+ +K ++ ++ +R+ + I
Sbjct: 84 E--ERSLRRGLLRLTNK----IGKKRDAYNIVEDIRTLKRRILDITRKRETFGI------ 131
Query: 148 PPTFVDPRILTLYENVTK-----------------LVGVDKASDDLMKRLSVGDEAPKKL 190
+F +PR EN+T +VG++ L+ +L + D K
Sbjct: 132 -GSFNEPR----GENITNVRVRQLRRAPPVDQEELVVGLEDDVKILLVKL-LSDNEKDKS 185
Query: 191 KMVSVVGIGGLGKTTLSKVVFDK--LKLQFDCAAFVPVGQNPEIKKVLKDILVELN 244
++S+ G+GGLGKT L++ +++ +K +FDC A+ V Q + + +L I+ L
Sbjct: 186 YIISIFGMGGLGKTALARKLYNSGDVKRRFDCRAWTYVSQEYKTRDILIRIIRSLG 241
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
Length = 901
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 125/250 (50%), Gaps = 23/250 (9%)
Query: 4 ATGAMGTLLPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTK 63
A G + + KL LL + + + E + L +L+ +Q+ L+ ++ +
Sbjct: 2 AEGVVSFGVQKLWALLNRESERLNGIDEQVDGLKRQLRGLQSLLKDADAK--KHGSDRVR 59
Query: 64 IWAWDIRELSYDIEDNIDTFMIC-VDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEI 122
+ D+++L +D ED I+++++ + G K+++ L C + RHK+A++I
Sbjct: 60 NFLEDVKDLVFDAEDIIESYVLNKLRGEGKGVKNHVRRL--ACF-----LTDRHKVASDI 112
Query: 123 KDIKSQVREVMERRDRYKI-----DDVATIPPTFVDPRILTLYENVTK--LVGVDKASDD 175
+ I ++ +V+ I D ++ + I + N ++ LVGV+++ ++
Sbjct: 113 EGITKRISKVIGEMQSLGIQQQIIDGGRSLSLQDIQREIRQTFPNSSESDLVGVEQSVEE 172
Query: 176 LMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPEIK 233
L+ + D +++VS+ G+GG+GKTTL++ +F D ++ FD A+V V Q K
Sbjct: 173 LVGPMVEID----NIQVVSISGMGGIGKTTLARQIFHHDLVRRHFDGFAWVCVSQQFTQK 228
Query: 234 KVLKDILVEL 243
V + IL EL
Sbjct: 229 HVWQRILQEL 238
>AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900
Length = 899
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 42/251 (16%)
Query: 14 KLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTKIWAWDIRELS 73
KL + L ++YD K V++ +T L + L +++ L+ + E + +I+++
Sbjct: 10 KLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKDADAKK--HISEMVRHCVEEIKDIV 67
Query: 74 YDIEDNIDTFMICVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEIKDIKSQVREVM 133
YD ED I+TF I + +E + ++ + + S I R ++A++I I ++ +V+
Sbjct: 68 YDTEDIIETF-ILKEKVEMKRG-----IMKRIKRFASTIMDRRELASDIGGISKRISKVI 121
Query: 134 ERRDRYKIDDVATIPPTFVDP------------------RILTLYENVTKLVGVDKASDD 175
+ + + + T P + + NV KLVG DD
Sbjct: 122 QDMQSFGVQQIITDGSRSSHPLQERQREMRHTFSRDSENDFVGMEANVKKLVGYLVEKDD 181
Query: 176 LMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPEIK 233
++VS+ G+GGLGKTTL++ VF D +K +FD A+V V Q
Sbjct: 182 Y--------------QIVSLTGMGGLGKTTLARQVFNHDVVKDRFDGFAWVSVSQEFTRI 227
Query: 234 KVLKDILVELN 244
V + IL L
Sbjct: 228 SVWQTILQNLT 238
>AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050
Length = 1049
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 45/198 (22%)
Query: 68 DIRELSYDIEDNIDTFMI-----CVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEI 122
+I+E+ YD ED I+TF++ G++ + + + D+ +L + ++I+ I
Sbjct: 64 EIKEIIYDGEDTIETFVLEQNLGKTSGIKKSIRRLACIIPDRRRYALGIGGLSNRISKVI 123
Query: 123 KDIKS---------------QVREVMERRDRYKIDDVATIPPTFVDPRILTLYENVTKLV 167
+D++S Q + E R R+ DD D + L NV KLV
Sbjct: 124 RDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDD---------DSDFVGLEANVKKLV 174
Query: 168 GVDKASDDLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKLQFDCAAFVP 225
G + DEA +++VS+ G+GGLGKTTL+K VF+ +K QFD ++V
Sbjct: 175 GY------------LVDEA--NVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVC 220
Query: 226 VGQNPEIKKVLKDILVEL 243
V Q+ V + IL +L
Sbjct: 221 VSQDFTRMNVWQKILRDL 238
>AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050
Length = 1049
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 45/198 (22%)
Query: 68 DIRELSYDIEDNIDTFMI-----CVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEI 122
+I+E+ YD ED I+TF++ G++ + + + D+ +L + ++I+ I
Sbjct: 64 EIKEIIYDGEDTIETFVLEQNLGKTSGIKKSIRRLACIIPDRRRYALGIGGLSNRISKVI 123
Query: 123 KDIKS---------------QVREVMERRDRYKIDDVATIPPTFVDPRILTLYENVTKLV 167
+D++S Q + E R R+ DD D + L NV KLV
Sbjct: 124 RDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDD---------DSDFVGLEANVKKLV 174
Query: 168 GVDKASDDLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKLQFDCAAFVP 225
G + DEA +++VS+ G+GGLGKTTL+K VF+ +K QFD ++V
Sbjct: 175 GY------------LVDEA--NVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVC 220
Query: 226 VGQNPEIKKVLKDILVEL 243
V Q+ V + IL +L
Sbjct: 221 VSQDFTRMNVWQKILRDL 238
>AT1G58602.1 | chr1:21760167-21763765 FORWARD LENGTH=1139
Length = 1138
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 28/242 (11%)
Query: 14 KLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTKIWAWDIRELS 73
KL +LL +Y L + V++ + L ++L +++ L+ + +I+++
Sbjct: 12 KLWDLLSHEYTLFQGVEDQVAELKSDLNLLKSFLKDADAK--KHTSALVRYCVEEIKDIV 69
Query: 74 YDIEDNIDTF-----MICVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEIKDIKSQ 128
YD ED ++TF + G+ K + D+ +L + +I I+D++S
Sbjct: 70 YDAEDVLETFVQKEKLGTTSGIRKHIKRLTCIVPDRREIALYIGHVSKRITRVIRDMQSF 129
Query: 129 VREVMERRD-----RYKIDDVATIPPTFVDPRILTLYENVTKLVGVDKASDDLMKRLSVG 183
+ M D R + ++ P + + L ENV KLVG D+
Sbjct: 130 GVQQMIVDDYMHPLRNREREIRRTFPKDNESGFVALEENVKKLVGYFVEEDNY------- 182
Query: 184 DEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPEIKKVLKDILV 241
++VS+ G+GGLGKTTL++ VF D + +FD A+V V Q+ +K V ++IL
Sbjct: 183 -------QVVSITGMGGLGKTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVWQNILG 235
Query: 242 EL 243
+L
Sbjct: 236 DL 237
>AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928
Length = 927
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 48/281 (17%)
Query: 14 KLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTKIWAWDIRELS 73
KL ELL + + E + L +L +Q+ L+ + E+ + + D++++
Sbjct: 12 KLWELLSRESARLNGIDEQVDGLKRQLGRLQSLLKDADAKKNET--ERVRNFLEDVKDIV 69
Query: 74 YDIEDNIDTFMIC-VDGLEPAKKHNL----TWLIDKCHKSLSKIKIRHKIANEIKDIKSQ 128
YD +D I++F++ + G E K + +L+D R K A++I+ I +
Sbjct: 70 YDADDIIESFLLNELRGKEKGIKKQVRTLACFLVD-----------RRKFASDIEGITKR 118
Query: 129 VREVMERRDRYKIDDVATIPPTFVDPRILTLYE------------NVTKLVGVDKASDDL 176
+ EV+ I +A R L+L E + + LVG+D++ ++L
Sbjct: 119 ISEVIVGMQSLGIQHIAD-----GGGRSLSLQERQREIRQTFSRNSESDLVGLDQSVEEL 173
Query: 177 MKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVF--DKLKLQFDCAAFVPVGQNPEIKK 234
+ L D +++VSV G+GG+GKTTL++ VF D ++ FD ++V V Q K
Sbjct: 174 VDHLVEND----SVQVVSVSGMGGIGKTTLARQVFHHDIVRRHFDGFSWVCVSQQFTRKD 229
Query: 235 VLKDILVELNKDKYMSFD--VTTVNERHMINELREYLDNRR 273
V + IL +L +D + ++E + EL E L++ R
Sbjct: 230 VWQRILQDLR-----PYDEGIIQMDEYTLQGELFELLESGR 265
>AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856
Length = 855
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 58/267 (21%)
Query: 1 MEFATGAMGTLLPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDE 60
+ F + LL + EL + D +K + L + LK A + S V + ++E
Sbjct: 6 ISFGIQNLWNLLSQECELFQGVEDQVTELKRDLNMLSSFLKDANAK-KHTSAVVKNCVEE 64
Query: 61 QTKIWAWDIRELSYDIEDNIDTFMI-----CVDGLEPAKKHNLTWLIDKCHKSLSKIKIR 115
I+E+ YD ED I+TF++ G++ + + + D+ +L +
Sbjct: 65 --------IKEIIYDGEDTIETFVLEQNLGKTSGIKKSIRRLACIIPDRRRYALGIGGLS 116
Query: 116 HKIANEIKDIKS---------------QVREVMERRDRYKIDDVATIPPTFVDPRILTLY 160
++I+ I+D++S Q + E R ++ DD D + L
Sbjct: 117 NRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDD---------DSDFVGLE 167
Query: 161 ENVTKLVG--VDKASDDLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKL 216
NV KLVG VD+A+ +++VS+ G+GGLGKTTL+K VF+ +K
Sbjct: 168 ANVKKLVGYLVDEAN----------------VQVVSITGMGGLGKTTLAKQVFNHEDVKH 211
Query: 217 QFDCAAFVPVGQNPEIKKVLKDILVEL 243
QFD ++V V Q+ V + IL +L
Sbjct: 212 QFDGLSWVCVSQDFTRMNVWQKILRDL 238
>AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018
Length = 1017
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 54/265 (20%)
Query: 1 MEFATGAMGTLLPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDE 60
+ F + LL + EL + D +K + L + LK A + S V + ++E
Sbjct: 6 ISFGIQNLWNLLSQECELFQGVEDQVTELKRDLNMLSSFLKDANAK-KHTSAVVKNCVEE 64
Query: 61 QTKIWAWDIRELSYDIEDNIDTFMI-----CVDGLEPAKKHNLTWLIDKCHKSLSKIKIR 115
I+E+ YD ED I+TF++ G++ + + + D+ +L +
Sbjct: 65 --------IKEIIYDGEDTIETFVLEQNLGKTSGIKKSIRRLACIIPDRRRYALGIGGLS 116
Query: 116 HKIANEIKDIKS---------------QVREVMERRDRYKIDDVATIPPTFVDPRILTLY 160
++I+ I+D++S Q + E R ++ DD D + L
Sbjct: 117 NRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDD---------DSDFVGLE 167
Query: 161 ENVTKLVGVDKASDDLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKLQF 218
NV KLVG + DEA +++VS+ G+GGLGKTTL+K VF+ +K QF
Sbjct: 168 ANVKKLVGY------------LVDEA--NVQVVSITGMGGLGKTTLAKQVFNHEDVKHQF 213
Query: 219 DCAAFVPVGQNPEIKKVLKDILVEL 243
D ++V V Q+ V + IL +L
Sbjct: 214 DGLSWVCVSQDFTRMNVWQKILRDL 238
>AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901
Length = 900
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 42/197 (21%)
Query: 68 DIRELSYDIEDNIDTFMICVDGLEPAKKHNLTWLIDKCHKSLSKIKI-RHKIANEIKDIK 126
+I+E+ YD E+ I+TF++ E A+K + +I + K L+ IK+ R + A++I I
Sbjct: 64 EIKEIVYDTENMIETFIL----KEAARKR--SGIIRRITK-LTCIKVHRWEFASDIGGIS 116
Query: 127 SQVREVMERRDRYKIDDVAT---------------IPPTF---VDPRILTLYENVTKLVG 168
++ +V++ + + + + + TF + + L NV KLVG
Sbjct: 117 KRISKVIQDMHSFGVQQMISDGSQSSHLLQEREREMRQTFSRGYESDFVGLEVNVKKLVG 176
Query: 169 VDKASDDLMKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKLQFDCAAFVPV 226
DD+ ++VSV G+GGLGKTTL++ VF+ +K QFD A+V V
Sbjct: 177 YLVEEDDI--------------QIVSVTGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCV 222
Query: 227 GQNPEIKKVLKDILVEL 243
Q K V + IL L
Sbjct: 223 SQEFTRKNVWQMILQNL 239
>AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848
Length = 847
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 2 EFATGAMGTLLPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQ 61
EF G K+ L E+ + VK+ + L EL IQ L+ V D+ DE
Sbjct: 7 EFVVG-------KIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVE--VCDKEDEV 57
Query: 62 TKIWAWDIRELSYDIEDNIDTFMICVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANE 121
+K W + +++YD+ED +DT+ + ++ + H L + + +S K + I ++
Sbjct: 58 SKEWTKLVLDIAYDVEDVLDTYFLKLE----KRLHRLGLM--RLTNIISDKKDAYNILDD 111
Query: 122 IKDIKSQVREVMERRDRYKIDDVATIPPTFVDPRILTLYENVT-----KLVGVDKASDDL 176
IK +K + +V + + Y I + R+ + + ++VG+ + L
Sbjct: 112 IKTLKRRTLDVTRKLEMYGIGNFNEHRVVASTSRVREVRRARSDDQEERVVGLTDDAKVL 171
Query: 177 MKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKLQFDCAAFVPVGQNPEIKK 234
+ +L + D+ K+ M+S+ G+ GLGKT+L++ +F+ +K F+ + V +
Sbjct: 172 LTKL-LDDDGDNKIYMISIFGMEGLGKTSLARKLFNSSDVKESFEYRVWTNVSGECNTRD 230
Query: 235 VLKDILVEL 243
+L I+ L
Sbjct: 231 ILMRIISSL 239
>AT1G58390.1 | chr1:21690962-21693891 REVERSE LENGTH=908
Length = 907
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 27/190 (14%)
Query: 68 DIRELSYDIEDNIDTFMIC-----VDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEI 122
+I+E+ YD ED I+T+++ G++ + + + D+ +L IR +I++ I
Sbjct: 64 EIKEIVYDAEDIIETYLLKEKLWKTSGIKMRIRRHACIISDRRRNALDVGGIRTRISDVI 123
Query: 123 KDIKS---QVREVMERRDRYKIDDVATIPPTF---VDPRILTLYENVTKLVGVDKASDDL 176
+D++S Q V + + D + TF + + L NV KLVG
Sbjct: 124 RDMQSFGVQQAIVDGGYMQPQGDRQREMRQTFSKDYESDFVGLEVNVKKLVGY------- 176
Query: 177 MKRLSVGDEAPKKLKMVSVVGIGGLGKTTLSKVVFDK--LKLQFDCAAFVPVGQNPEIKK 234
+ DE + +++VS+ G+GGLGKTTL++ VF+ +K QFD A+V V Q K
Sbjct: 177 -----LVDE--ENVQVVSITGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRKN 229
Query: 235 VLKDILVELN 244
V + IL L
Sbjct: 230 VWQMILQNLT 239
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
Length = 852
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 141/271 (52%), Gaps = 26/271 (9%)
Query: 11 LLPKLVELLKEQYDLQKSVKEGITFLIAELKSIQAALEKVSKVPLDQLDEQTKIWAWDIR 70
L K + +L+E+ ++ + L +ELK +Q+ L+ + + +E + D+R
Sbjct: 9 FLEKTLNILEEKGRTVSDYRKQLEDLQSELKYMQSFLKDAERQ--KRTNETLRTLVADLR 66
Query: 71 ELSYDIEDNIDTFMICVDGLEPAKKHNLTWLIDKCHKSLSKIKIRHKIANEIKDIKSQVR 130
EL Y+ ED + + DG + ++ + + + H + ++ +++K + +++I ++
Sbjct: 67 ELVYEAEDILVDCQL-ADGDDGNEQRSSNAWLSRLHPA--RVPLQYKKSKRLQEINERIT 123
Query: 131 EVMERRDRYKIDDVATIPPTFV------DPRILTLYENVTKLVGVDKASDDLMKRLSVGD 184
++ + + Y I P+ V D +Y++ T++VG++ + + L +
Sbjct: 124 KIKSQVEPY----FEFITPSNVGRDNGTDRWSSPVYDH-TQVVGLEGDKRKIKEWLFRSN 178
Query: 185 EAPKKLKMVSVVGIGGLGKTTLSKVVFD--KLKLQFDCAAFVPVGQNPEIKKVLKDILVE 242
++ +L +++ VG+GGLGKTT+++ VF+ +++ +F+ +V V Q +++++ IL
Sbjct: 179 DS--QLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRN 236
Query: 243 LNKDKYMSFDVTTVNERHMINELREYLDNRR 273
L D + D+ T ++ ++++YL +R
Sbjct: 237 LG-DASVGDDIGT-----LLRKIQQYLLGKR 261
>AT4G09420.1 | chr4:5962319-5963776 REVERSE LENGTH=458
Length = 457
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 125 IKSQVREVMERRDRYKIDDVATIPPTFVDPRILTLYENVTKLVGVDKASDDLMKRLSVGD 184
I SQV++++ +D+ +I+ ATI T + +I +L L+G+D+ L + L +
Sbjct: 164 ITSQVKQILLDKDK-QINLKATISHTVSNKQINSLTTKNVGLIGLDRHMLALNELLDL-- 220
Query: 185 EAPKKLKMVSVVGIGGLGKTTLSKVVFDKLKLQFDCAAFV 224
++ ++++++ + G GG+GKTTL++ V+++L F FV
Sbjct: 221 KSNEEVRLIGICGQGGVGKTTLARYVYEELFKNFHAHVFV 260
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,517,863
Number of extensions: 222226
Number of successful extensions: 1078
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 1078
Number of HSP's successfully gapped: 21
Length of query: 273
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 176
Effective length of database: 8,447,217
Effective search space: 1486710192
Effective search space used: 1486710192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)